myRT

myRT report for GCA_001767885.1_ASM176788v1

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Seq: MEMH01000012.1 Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_30 rifcsphigho2_02_scaffold_18024, whole genome shotgun sequence (8782 bp)
Overview 1 RT 1: 1-3485 bp Neighborhood of RT #1 [1, 3485] RVT_N RVT-GII RVT-UG4 Feature: gene Location: 1-654 bp Feature: domain Description: RVT_N Location: 7-229 bp Feature: domain Description: RVT_N Location: 7-229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-640 bp Feature: gene Location: 666-1058 bp Ori: OFW92724.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 669-888 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 669-888 bp Feature: gene Location: 1596-2087 bp Feature: gene Location: 2151-3485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, RVT-UG4

Seq: MEMH01000038.1 Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_30 rifcsphigho2_02_scaffold_39368, whole genome shotgun sequence (5419 bp)
Overview 1 RT 1: 2721-5387 bp Neighborhood of RT #1 [2721, 5387] RVT_N RVT-GII GIIM Feature: gene Location: 2721-3005 bp Feature: gene Location: 3156-3413 bp Feature: gene Location: 3521-5047 bp Ori: OFW91518.1 Feature: domain Description: RVT_N Location: 3578-3821 bp Feature: domain Description: RVT_N Location: 3578-382 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3866-4490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3866-4490 bp Feature: domain Description: GIIM Note: maturase Location: 4541-4775 bp Feature: domain Description: GIIM Note: maturase Location: 4541-4775 bp Feature: gene Location: 5106-5387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)