myRT

myRT report for GCA_001768205.1_ASM176820v1

Download annotations/find similar RTs

Seq: MENJ01000040.1 Bacteroidetes bacterium GWA2_42_15 gwa2_scaffold_253, whole genome shotgun sequence (164021 bp)
Overview 1 RT 1: 54135-60125 bp Neighborhood of RT #1 [54135, 60724] SRPBCC_CalC_Aha1-like_9 HTH_ARSR RVT-UG2 YcjR MviM MviM Feature: gene Location: 54135-54611 bp Ori: OFX33243.1 Feature: domain Description: SRPBCC_CalC_Aha1-like_9 Location: 54180-54591 bp Feature: domain Description: SRPBCC_CalC_Aha1 -like_9 Location: 541 80-54591 bp Feature: gene Location: 54613-54942 bp Ori: OFX33244.1 Feature: domain Description: HTH_ARSR Location: 54637-54865 bp Feature: domain Description: HTH_ARSR Location: 54637-54865 bp Feature: gene Location: 56034-57605 bp Ori: OFX33245.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 56268-57183 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 56268-571 83 bp Feature: gene Location: 58442-59278 bp Ori: OFX33246.1 Feature: domain Description: YcjR Location: 58592-59264 bp Feature: domain Description: YcjR Location: 58592-59264 bp Feature: gene Location: 59285-60724 bp Ori: OFX33247.1 Feature: domain Description: MviM Location: 59432-59927 bp Feature: domain Description: MviM Location: 59432-59927 bp Feature: domain Description: MviM Location: 59999-60125 bp Feature: domain Description: MviM Location: 59999-601 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRPBCC_CalC_Aha1-like_9 (cd07826), HTH_ARSR (smart00418), RVT-UG2, YcjR (COG1082), MviM (COG0673)

Seq: MENJ01000060.1 Bacteroidetes bacterium GWA2_42_15 gwa2_scaffold_444, whole genome shotgun sequence (206187 bp)
Overview 1 RT 1: 188948-195224 bp Neighborhood of RT #1 [188948, 195346] DUF4099 DUF3945 DUF3945 TIR_2 RVT-GII GIIM COG1907 dNK Feature: gene Location: 188948-190324 bp Ori: OFX31846.1 Feature: domain Description: DUF4099 Location: 189338-189584 bp Feature: domain Description: DUF4099 Location: 189338-189584 bp Feature: domain Description: DUF3945 Location: 189680-189854 bp Feature: domain Description: DUF3945 Location: 189680-189854 bp Feature: domain Description: DUF3945 Location: 189956-190067 bp Feature: domain Description: DUF3945 Location: 189956-190067 bp Feature: gene Location: 190468-191406 bp Ori: OFX31847.1 Feature: domain Description: TIR_2 Location: 190477-190765 bp Feature: domain Description: TIR_2 Location: 190477-190765 bp Feature: gene Location: 191665-192891 bp Ori: OFX31848.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191878-192532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191878-192 532 bp Feature: domain Description: GIIM Note: maturase Location: 192613-192841 bp Feature: domain Description: GIIM Note: maturase Location: 192 613-192 841 bp Feature: gene Location: 193708-194658 bp Ori: OFX31849.1 Feature: domain Description: COG1907 Location: 193717-194596 bp Feature: domain Description: COG1907 Location: 193717-194596 bp Feature: gene Location: 194660-195346 bp Ori: OFX31850.1 Feature: domain Description: dNK Location: 194732-195224 bp Feature: domain Description: dNK Location: 194732 -1952 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4099 (pfam13351), DUF3945 (pfam13101), TIR_2 (pfam13676), RVT-GII, GIIM (pfam08388), COG1907 (Predicted archaeal sugar kinase ), dNK (pfam01712)

Seq: MENJ01000021.1 Bacteroidetes bacterium GWA2_42_15 gwa2_scaffold_1663, whole genome shotgun sequence (66077 bp)
Overview 1 RT 1: 12138-17706 bp Neighborhood of RT #1 [12138, 17990] CHD RVT-GII GIIM YbbR Feature: gene Location: 12138-12914 bp Ori: OFX34990.1 Feature: domain Description: CHD Location: 12420-12780 bp Feature: domain Description: CHD Location: 12420-12780 bp Feature: gene Location: 12898-13518 bp Feature: gene Location: 14198-15514 bp Ori: OFX34992.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14393-15008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 93 -15008 bp Feature: domain Description: GIIM Note: maturase Location: 15080-15293 bp Feature: domain Description: GIIM Note: maturase Location: 15080-15293 bp Feature: gene Location: 15572-16396 bp Feature: gene Location: 17109-17990 bp Ori: OFX34994.1 Feature: domain Description: YbbR Location: 17469-17706 bp Feature: domain Description: YbbR Location: 17469-17706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), YbbR (pfam07949)

Seq: MENJ01000081.1 Bacteroidetes bacterium GWA2_42_15 gwa2_scaffold_623, whole genome shotgun sequence (60683 bp)
Overview 1 RT 1: 51332-60683 bp Neighborhood of RT #1 [51332, 60683] SMC_prok_B SMC_prok_B SMC_prok_B RVT-DGRs Feature: gene Location: 51332-54985 bp Ori: OFX30360.1 Feature: domain Description: SMC_prok_B Location: 51386-51893 bp Feature: domain Description: SMC_prok_B Location: 51386-51893 bp Feature: domain Description: SMC_prok_B Location: 53333-54194 bp Feature: domain Description: SMC_prok_B Location: 53333-54 194 bp Feature: domain Description: SMC_prok_B Location: 54308-54944 bp Feature: domain Description: SMC_prok_B Location: 54 308-54 94 4 bp Feature: gene Location: 55017-56735 bp Feature: gene Location: 56982-58247 bp Ori: OFX30362.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57192-57786 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 57192-57786 bp Feature: gene Location: 58259-58453 bp Feature: gene Location: 58456-60683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), RVT-DGRs