myRT

myRT report for GCA_001768535.1_ASM176853v1

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Seq: MEOB01000030.1 Bacteroidetes bacterium GWE2_42_39 gwe2_scaffold_311, whole genome shotgun sequence (60856 bp)
Overview 1 RT 1: 1-9413 bp Neighborhood of RT #1 [1, 9454] RVT-DGRs SMC_prok_B SMC_prok_B SMC_prok_B Feature: gene Location: 1-2330 bp Feature: gene Location: 2333-2527 bp Feature: gene Location: 2539-3804 bp Ori: OFX99060.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2749-3343 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2749-3343 bp Feature: gene Location: 4051-5769 bp Feature: gene Location: 5801-9454 bp Ori: OFX99062.1 Feature: domain Description: SMC_prok_B Location: 5855-6362 bp Feature: domain Description: SMC_prok_B Location: 5855-6362 bp Feature: domain Description: SMC_prok_B Location: 7802-8663 bp Feature: domain Description: SMC_prok_B Location: 7802-8663 bp Feature: domain Description: SMC_prok_B Location: 8777-9413 bp Feature: domain Description: SMC_prok_B Location: 8777-941 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, SMC_prok_B (TIGR02168)

Seq: MEOB01000033.1 Bacteroidetes bacterium GWE2_42_39 gwe2_scaffold_33, whole genome shotgun sequence (317884 bp)
Overview 1 RT 1: 122045-128186 bp Neighborhood of RT #1 [122045, 128443] dNK COG1907 RVT-GII GIIM TIR_2 DUF4099 DUF3945 DUF3945 Feature: gene Location: 122045-122731 bp Ori: OFX98707.1 Feature: domain Description: dNK Location: 122117-122609 bp Feature: domain Description: dNK Location: 12 2 117-12 2 609 bp Feature: gene Location: 122733-123683 bp Ori: OFX98708.1 Feature: domain Description: COG1907 Location: 122742-123621 bp Feature: domain Description: COG1907 Location: 12 2 742 -12 362 1 bp Feature: gene Location: 124500-125726 bp Ori: OFX98709.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124713-125367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 4713-12 5367 bp Feature: domain Description: GIIM Note: maturase Location: 125448-125676 bp Feature: domain Description: GIIM Note: maturase Location: 12 5448-12 5676 bp Feature: gene Location: 125985-126923 bp Ori: OFX98710.1 Feature: domain Description: TIR_2 Location: 125994-126282 bp Feature: domain Description: TIR_2 Location: 12 5994-12 62 82 bp Feature: gene Location: 127067-128443 bp Ori: OFX98711.1 Feature: domain Description: DUF4099 Location: 127457-127703 bp Feature: domain Description: DUF4099 Location: 12 7457-12 7703 bp Feature: domain Description: DUF3945 Location: 127799-127973 bp Feature: domain Description: DUF3945 Location: 12 7799-12 7973 bp Feature: domain Description: DUF3945 Location: 128075-128186 bp Feature: domain Description: DUF3945 Location: 12 8075-12 8186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dNK (pfam01712), COG1907 (Predicted archaeal sugar kinase ), RVT-GII, GIIM (pfam08388), TIR_2 (pfam13676), DUF4099 (pfam13351), DUF3945 (pfam13101)

Seq: MEOB01000008.1 Bacteroidetes bacterium GWE2_42_39 gwe2_scaffold_16, whole genome shotgun sequence (273519 bp)
Overview 1 RT 1: 212480-219049 bp Neighborhood of RT #1 [212480, 219069] MviM MviM YcjR RVT-UG2 HTH_ARSR SRPBCC_CalC_Aha1-like_9 Feature: gene Location: 212480-213919 bp Ori: OFY02595.1 Feature: domain Description: MviM Location: 212627-213122 bp Feature: domain Description: MviM Location: 212627-213 122 bp Feature: domain Description: MviM Location: 213194-213320 bp Feature: domain Description: MviM Location: 213 194-213 3 20 bp Feature: gene Location: 213926-214762 bp Ori: OFY02596.1 Feature: domain Description: YcjR Location: 214076-214748 bp Feature: domain Description: YcjR Location: 214076-214748 bp Feature: gene Location: 215599-217170 bp Ori: OFY02597.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 215833-216748 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 21583 3 -216748 bp Feature: gene Location: 218262-218591 bp Ori: OFY02598.1 Feature: domain Description: HTH_ARSR Location: 218286-218514 bp Feature: domain Description: HTH_ARSR Location: 218286-218514 bp Feature: gene Location: 218593-219069 bp Ori: OFY02599.1 Feature: domain Description: SRPBCC_CalC_Aha1-like_9 Location: 218638-219049 bp Feature: domain Description: SRPBCC_CalC_Aha1-like_9 Location: 21863 8-219049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), YcjR (COG1082), RVT-UG2, HTH_ARSR (smart00418), SRPBCC_CalC_Aha1-like_9 (cd07826)

Seq: MEOB01000017.1 Bacteroidetes bacterium GWE2_42_39 gwe2_scaffold_20, whole genome shotgun sequence (533514 bp)
Overview 1 RT 1: 254477-260045 bp Neighborhood of RT #1 [254477, 260329] CHD RVT-GII GIIM YbbR Feature: gene Location: 254477-255253 bp Ori: OFY01143.1 Feature: domain Description: CHD Location: 254759-255119 bp Feature: domain Description: CHD Location: 254 759-255119 bp Feature: gene Location: 255237-255857 bp Feature: gene Location: 256537-257853 bp Ori: OFY01145.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256732-257347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256732-25734 7 bp Feature: domain Description: GIIM Note: maturase Location: 257419-257632 bp Feature: domain Description: GIIM Note: maturase Location: 2574 19-257632 bp Feature: gene Location: 257911-258735 bp Feature: gene Location: 259448-260329 bp Ori: OFY01147.1 Feature: domain Description: YbbR Location: 259808-260045 bp Feature: domain Description: YbbR Location: 259808-26004 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), YbbR (pfam07949)