myRT

myRT report for GCA_001768845.1_ASM176884v1

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Seq: MEMK01000004.1 Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100 rifcsphigho2_12_scaffold_108780, whole genome shotgun sequence (5304 bp)
Overview 1 RT 1: 2714-5304 bp Neighborhood of RT #1 [2714, 5304] RVT_N RVT-GII GIIM Feature: gene Location: 2714-2998 bp Feature: gene Location: 3149-3406 bp Feature: gene Location: 3514-5040 bp Ori: OFW85078.1 Feature: domain Description: RVT_N Location: 3571-3814 bp Feature: domain Description: RVT_N Location: 3571 -381 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3859-4483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3859-4483 bp Feature: domain Description: GIIM Note: maturase Location: 4534-4768 bp Feature: domain Description: GIIM Note: maturase Location: 4534-4768 bp Feature: gene Location: 5099-5304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MEMK01000009.1 Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_100 rifcsphigho2_12_scaffold_14677, whole genome shotgun sequence (8995 bp)
Overview 1 RT 1: 113-3669 bp Neighborhood of RT #1 [113, 3669] RVT_N RVT-GII RVT-UG4 Feature: gene Location: 113-838 bp Ori: OFW84913.1 Feature: domain Description: RVT_N Location: 170-413 bp Feature: domain Description: RVT_N Location: 170-413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-82 4 bp Feature: gene Location: 850-1242 bp Ori: OFW84914.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 853-1072 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 853-1072 bp Feature: gene Location: 1780-2271 bp Feature: gene Location: 2335-3669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, RVT-UG4