myRT

myRT report for GCA_001769245.1_ASM176924v1

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Seq: MEOO01000004.1 Bacteroidetes bacterium GWF2_42_66 gwf2_scaffold_1350, whole genome shotgun sequence (82771 bp)
Overview 1 RT 1: 63476-73056 bp Neighborhood of RT #1 [63476, 73056] SMC_prok_B SMC_prok_B SMC_prok_B RVT-DGRs Feature: gene Location: 63476-67129 bp Ori: OFY46769.1 Feature: domain Description: SMC_prok_B Location: 63530-64037 bp Feature: domain Description: SMC_prok_B Location: 63530-64037 bp Feature: domain Description: SMC_prok_B Location: 65477-66338 bp Feature: domain Description: SMC_prok_B Location: 65477-66338 bp Feature: domain Description: SMC_prok_B Location: 66452-67088 bp Feature: domain Description: SMC_prok_B Location: 66452-67088 bp Feature: gene Location: 67161-68879 bp Feature: gene Location: 69126-70391 bp Ori: OFY46771.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69336-69930 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69336-69930 bp Feature: gene Location: 70403-70597 bp Feature: gene Location: 70600-73056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), RVT-DGRs

Seq: MEOO01000039.1 Bacteroidetes bacterium GWF2_42_66 gwf2_scaffold_54, whole genome shotgun sequence (533498 bp)
Overview 1 RT 1: 254458-260026 bp Neighborhood of RT #1 [254458, 260310] CHD RVT-GII GIIM YbbR Feature: gene Location: 254458-255234 bp Ori: OFY41986.1 Feature: domain Description: CHD Location: 254740-255100 bp Feature: domain Description: CHD Location: 2 54740-2 55100 bp Feature: gene Location: 255218-255838 bp Feature: gene Location: 256518-257834 bp Ori: OFY41988.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256713-257328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56713-2 5732 8 bp Feature: domain Description: GIIM Note: maturase Location: 257400-257613 bp Feature: domain Description: GIIM Note: maturase Location: 2 57400-2 57613 bp Feature: gene Location: 257892-258716 bp Feature: gene Location: 259429-260310 bp Ori: OFY41990.1 Feature: domain Description: YbbR Location: 259789-260026 bp Feature: domain Description: YbbR Location: 2 59789-2 6002 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), YbbR (pfam07949)

Seq: MEOO01000041.1 Bacteroidetes bacterium GWF2_42_66 gwf2_scaffold_56, whole genome shotgun sequence (273529 bp)
Overview 1 RT 1: 54459-60449 bp Neighborhood of RT #1 [54459, 61048] SRPBCC_CalC_Aha1-like_9 HTH_ARSR RVT-UG2 YcjR MviM MviM Feature: gene Location: 54459-54935 bp Ori: OFY41301.1 Feature: domain Description: SRPBCC_CalC_Aha1-like_9 Location: 54504-54915 bp Feature: domain Description: SRPBCC_CalC_Aha1-like_9 Location: 54504-54915 bp Feature: gene Location: 54937-55266 bp Ori: OFY41302.1 Feature: domain Description: HTH_ARSR Location: 54961-55189 bp Feature: domain Description: HTH_ARSR Location: 54961-55189 bp Feature: gene Location: 56358-57929 bp Ori: OFY41303.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 56592-57507 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 56592-57507 bp Feature: gene Location: 58766-59602 bp Ori: OFY41304.1 Feature: domain Description: YcjR Location: 58916-59588 bp Feature: domain Description: YcjR Location: 58916-59588 bp Feature: gene Location: 59609-61048 bp Ori: OFY41305.1 Feature: domain Description: MviM Location: 59756-60251 bp Feature: domain Description: MviM Location: 59756-60251 bp Feature: domain Description: MviM Location: 60323-60449 bp Feature: domain Description: MviM Location: 603 23 -60449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRPBCC_CalC_Aha1-like_9 (cd07826), HTH_ARSR (smart00418), RVT-UG2, YcjR (COG1082), MviM (COG0673)

Seq: MEOO01000035.1 Bacteroidetes bacterium GWF2_42_66 gwf2_scaffold_46, whole genome shotgun sequence (317895 bp)
Overview 1 RT 1: 189453-195729 bp Neighborhood of RT #1 [189453, 195851] DUF4099 DUF3945 DUF3945 TIR_2 RVT-GII GIIM COG1907 dNK Feature: gene Location: 189453-190829 bp Ori: OFY43090.1 Feature: domain Description: DUF4099 Location: 189843-190089 bp Feature: domain Description: DUF4 099 Location: 18984 3-190089 bp Feature: domain Description: DUF3945 Location: 190185-190359 bp Feature: domain Description: DUF394 5 Location: 190185-190359 bp Feature: domain Description: DUF3945 Location: 190461-190572 bp Feature: domain Description: DUF394 5 Location: 1904 61-190572 bp Feature: gene Location: 190973-191911 bp Ori: OFY43091.1 Feature: domain Description: TIR_2 Location: 190982-191270 bp Feature: domain Description: TIR_2 Location: 190982-191270 bp Feature: gene Location: 192170-193396 bp Ori: OFY43092.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192383-193037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192383-193037 bp Feature: domain Description: GIIM Note: maturase Location: 193118-193346 bp Feature: domain Description: GIIM Note: maturase Location: 193118-19334 6 bp Feature: gene Location: 194213-195163 bp Ori: OFY43093.1 Feature: domain Description: COG1907 Location: 194222-195101 bp Feature: domain Description: COG1907 Location: 194 222-195101 bp Feature: gene Location: 195165-195851 bp Ori: OFY43094.1 Feature: domain Description: dNK Location: 195237-195729 bp Feature: domain Description: dNK Location: 195237-195729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4099 (pfam13351), DUF3945 (pfam13101), TIR_2 (pfam13676), RVT-GII, GIIM (pfam08388), COG1907 (Predicted archaeal sugar kinase ), dNK (pfam01712)