myRT

myRT report for GCA_001770075.1_ASM177007v1

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Seq: MEQD01000290.1 Bdellovibrionales bacterium RIFOXYC1_FULL_54_43 rifoxyc1_full_scaffold_3993, whole genome shotgun sequence (12362 bp)
Overview 1 RT 1: 5743-9796 bp Neighborhood of RT #1 [5743, 9796] Acetyltransf_1 RVT-Retrons HTH_XRE Feature: gene Location: 5743-6030 bp Feature: gene Location: 6117-6566 bp Feature: domain Description: Acetyltransf_1 Location: 6204-6525 bp Feature: domain Description: Acetyltransf_1 Location: 6204-6525 bp Feature: gene Location: 6885-7802 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7038-7563 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7038-7563 bp Feature: gene Location: 7789-8112 bp Feature: domain Description: HTH_XRE Location: 7831-7999 bp Feature: domain Description: HTH_XRE Location: 7831 -7999 bp Feature: gene Location: 8852-9796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-Retrons, HTH_XRE (smart00530)

Seq: MEQD01000381.1 Bdellovibrionales bacterium RIFOXYC1_FULL_54_43 rifoxyc1_full_scaffold_550, whole genome shotgun sequence (32726 bp)
Overview 1 RT 1: 14802-19658 bp Neighborhood of RT #1 [14802, 19711] RVT-GII group_II_RT_mat COG4244 Feature: gene Location: 14802-16841 bp Feature: gene Location: 16977-17192 bp Feature: gene Location: 17366-17956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17582-17954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17582 -17954 bp Feature: gene Location: 18152-18550 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18158-18434 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18158-18434 bp Feature: gene Location: 19190-19711 bp Feature: domain Description: COG4244 Location: 19235-19658 bp Feature: domain Description: COG42 44 Location: 192 35-19658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), COG4244 (Uncharacterized membrane protein )