myRT

myRT report for GCA_001770855.1_ASM177085v1

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Seq: MESE01000096.1 Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 rifcsplowo2_02_scaffold_4, whole genome shotgun sequence (339837 bp)
Overview 1 RT 1: 230137-235595 bp Neighborhood of RT #1 [230137, 235615] FcbT2 FcbT3 RVT-GII GIIM TAT_signal_seq PBP2_TRAP_alpha-ketoacid Feature: gene Location: 230137-230745 bp Feature: domain Description: FcbT2 Location: 230140-230668 bp Feature: domain Description: FcbT2 Location: 2301 40-230668 bp Feature: gene Location: 230745-232532 bp Feature: domain Description: FcbT3 Location: 230757-232320 bp Feature: domain Description: FcbT3 Location: 230757-232320 bp Feature: gene Location: 232799-234069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233183-233759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2331 83-233759 bp Feature: domain Description: GIIM Note: maturase Location: 233816-233951 bp Feature: domain Description: GIIM Note: maturase Location: 23381 6-233951 bp Feature: gene Location: 234174-234414 bp Feature: gene Location: 234533-235615 bp Feature: domain Description: TAT_signal_seq Location: 234539-234605 bp Feature: domain Description: TAT_signal_seq Location: 234539-234605 bp Feature: domain Description: PBP2_TRAP_alpha-ketoacid Location: 234629-235595 bp Feature: domain Description: PBP2_TRAP_alpha-ketoacid Location: 234629-235595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FcbT2 (COG4665), FcbT3 (COG4664), RVT-GII, GIIM (pfam08388), TAT_signal_seq (TIGR01409), PBP2_TRAP_alpha-ketoacid (cd13682)

Seq: MESE01000094.1 Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 rifcsplowo2_02_scaffold_36, whole genome shotgun sequence (208968 bp)
Overview 1 RT 1: 76-3716 bp Neighborhood of RT #1 [76, 3733] Dcm Dcm RVT-DGRs Avd_like DUF1566 Feature: gene Location: 76-1494 bp Feature: domain Description: Dcm Location: 130-562 bp Feature: domain Description: Dcm Location: 130-562 bp Feature: domain Description: Dcm Location: 649-979 bp Feature: domain Description: Dcm Location: 649-979 bp Feature: gene Location: 1491-2576 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1650-2337 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1650-2 337 bp Feature: gene Location: 2897-3250 bp Feature: domain Description: Avd_like Location: 2924-3230 bp Feature: domain Description: Avd_like Location: 2 92 4-32 30 bp Feature: gene Location: 3269-3733 bp Feature: domain Description: DUF1566 Location: 3533-3716 bp Feature: domain Description: DUF1566 Location: 3533-3716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603), Dcm (COG0270)

Seq: MESE01000029.1 Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 rifcsplowo2_02_scaffold_1312, whole genome shotgun sequence (47296 bp)
Overview 1 RT 1: 33413-38217 bp Neighborhood of RT #1 [33413, 38217] DUF1566 Avd_like RVT-DGRs nucleoid_noc Feature: gene Location: 33413-33883 bp Feature: domain Description: DUF1566 Location: 33626-33863 bp Feature: domain Description: DUF1566 Location: 3 3 626-3 3 863 bp Feature: gene Location: 33917-34279 bp Feature: domain Description: Avd_like Location: 33944-34256 bp Feature: domain Description: Avd_like Location: 3 3 944-3 4256 bp Feature: gene Location: 34531-35634 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 34723-35404 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 4723 -3 5404 bp Feature: gene Location: 35639-37711 bp Feature: domain Description: nucleoid_noc Location: 35693-36266 bp Feature: domain Description: nucleoid_noc Location: 3 5693 -3 6266 bp Feature: gene Location: 37786-38217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, nucleoid_noc (TIGR04285)