myRT

myRT report for GCA_001777135.1_ASM177713v1

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Seq: MLCD01000012.1 Klebsiella pneumoniae strain B6418 NODE_12_length_65386_cov_8.02054_ID_23, whole genome shotgun sequence (65386 bp)
Overview 1 RT 1: 27636-33104 bp Neighborhood of RT #1 [27636, 33124] conj_conj_conj_TIGR03751 traC_PFL_4706 RVT-UG2 HTH_XRE HTH_XRE Feature: gene Location: 27636-27995 bp Ori: OGE61260.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 27654-27981 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 27654-27981 bp Feature: gene Location: 27992-30622 bp Ori: OGE61261.1 Feature: domain Description: traC_PFL_4706 Location: 28031-30611 bp Feature: domain Description: traC_PFL_4706 Location: 28031 -3061 1 bp Feature: gene Location: 31109-32386 bp Ori: OGE61262.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 31307-32093 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 31 307-32093 bp Feature: gene Location: 32584-32811 bp Ori: OGE61263.1 Feature: domain Description: HTH_XRE Location: 32626-32788 bp Feature: domain Description: HTH_XRE Location: 32626-32788 bp Feature: gene Location: 32894-33124 bp Ori: OGE61264.1 Feature: domain Description: HTH_XRE Location: 32936-33104 bp Feature: domain Description: HTH_XRE Location: 32936-331 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_conj_conj_TIGR03751, traC_PFL_4706 (TIGR03744), RVT-UG2, HTH_XRE (smart00530)

Seq: MLCD01000074.1 Klebsiella pneumoniae strain B6418 NODE_74_length_25674_cov_5.74741_ID_147, whole genome shotgun sequence (25674 bp)
Overview 1 RT 1: 5062-12462 bp Neighborhood of RT #1 [5062, 12497] RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 5062-5304 bp Feature: gene Location: 5311-5925 bp Feature: gene Location: 6614-7715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6794-7202 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6794-72 02 bp Feature: gene Location: 7829-10078 bp Feature: domain Description: AAA_15 Location: 7832-8840 bp Feature: domain Description: AAA_15 Location: 7832 -8840 bp Feature: gene Location: 11478-12497 bp Ori: OGE59753.1 Feature: domain Description: DUF4917 Location: 11538-12462 bp Feature: domain Description: DUF4917 Location: 11538-12 462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)

Seq: MLCD01000005.1 Klebsiella pneumoniae strain B6418 NODE_5_length_101791_cov_5.32144_ID_9, whole genome shotgun sequence (101791 bp)
Overview 1 RT 1: 87870-92938 bp Neighborhood of RT #1 [87870, 92938] PRK10276 RVT-GII Lipase_GDSL_2 Feature: gene Location: 87870-88187 bp Ori: OGE61637.1 Feature: domain Description: PRK10276 Location: 87876-87990 bp Feature: domain Description: PRK10276 Location: 87876-87990 bp Feature: gene Location: 88187-88426 bp Feature: gene Location: 88504-89989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88906-89596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88906-89596 bp Feature: gene Location: 90409-90831 bp Ori: OGE61639.1 Feature: domain Description: Lipase_GDSL_2 Location: 90439-90778 bp Feature: domain Description: Lipase_GDSL_2 Location: 9043 9-90778 bp Feature: gene Location: 92549-92938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Lipase_GDSL_2 (pfam13472)