myRT

myRT report for GCA_001778135.1_ASM177813v1

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Seq: MFGD01000007.1 Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_34_18 rifoxyb2_full_scaffold_18, whole genome shotgun sequence (163704 bp)
Overview 1 RT 1: 155622-163699 bp Neighborhood of RT #1 [155622, 163704] AbiEii COG5340 RVT-DGRs Avd_like Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Laminin_G_3 Fib_succ_major Feature: gene Location: 155622-156344 bp Feature: domain Description: AbiEii Location: 155712-156186 bp Feature: domain Description: AbiEii Location: 1 5571 2-1 561 86 bp Feature: gene Location: 156334-156936 bp Feature: domain Description: COG5340 Location: 156376-156619 bp Feature: domain Description: COG5340 Location: 1 56376-1 5661 9 bp Feature: gene Location: 156980-158048 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 157001-157277 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 57001 -1 57277 bp Feature: gene Location: 158640-158981 bp Feature: domain Description: Avd_like Location: 158667-158970 bp Feature: domain Description: Avd_like Location: 1 58667-1 58970 bp Feature: gene Location: 159013-163704 bp Feature: domain Description: Laminin_G_3 Location: 159187-159670 bp Feature: domain Description: Laminin_G_3 Location: 1 591 87-1 59670 bp Feature: domain Description: Laminin_G_3 Location: 159901-160369 bp Feature: domain Description: Laminin_G_3 Location: 1 59901 -1 60369 bp Feature: domain Description: Laminin_G_3 Location: 160537-160990 bp Feature: domain Description: Laminin_G_3 Location: 1 60537-1 60990 bp Feature: domain Description: Laminin_G_3 Location: 161194-161635 bp Feature: domain Description: Laminin_G_3 Location: 1 61 1 94-1 61 635 bp Feature: domain Description: Laminin_G_3 Location: 161923-162397 bp Feature: domain Description: Laminin_G_3 Location: 1 61 923-1 62397 bp Feature: domain Description: Laminin_G_3 Location: 162607-162853 bp Feature: domain Description: Laminin_G_3 Location: 1 62607-1 62853 bp Feature: domain Description: Laminin_G_3 Location: 162895-162967 bp Feature: domain Description: Laminin_G_3 Location: 1 62895-1 62967 bp Feature: domain Description: Fib_succ_major Location: 163069-163699 bp Feature: domain Description: Fib_succ_major Location: 1 63069-1 63699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-DGRs, Avd_like (cd16376), Laminin_G_3 (pfam13385), Fib_succ_major (TIGR02145)

Seq: MFGD01000028.1 Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_34_18 rifoxyb2_full_scaffold_587, whole genome shotgun sequence (28046 bp)
Overview 1 RT 1: 12331-15505 bp Neighborhood of RT #1 [12331, 15505] HTH_XRE RVT-Retrons Feature: gene Location: 12331-12621 bp Feature: gene Location: 12584-12892 bp Feature: domain Description: HTH_XRE Location: 12596-12764 bp Feature: domain Description: HTH_XRE Location: 12 596-12 764 bp Feature: gene Location: 12892-13842 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13030-13576 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13030-13576 bp Feature: gene Location: 13839-14540 bp Feature: gene Location: 14912-15505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons