myRT

myRT report for GCA_001778325.1_ASM177832v1

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Seq: MFGO01000020.1 Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_34_120 rifoxyd2_full_scaffold_268, whole genome shotgun sequence (28071 bp)
Overview 1 RT 1: 12337-15511 bp Neighborhood of RT #1 [12337, 15511] HTH_XRE RVT-Retrons Feature: gene Location: 12337-12627 bp Feature: gene Location: 12590-12898 bp Feature: domain Description: HTH_XRE Location: 12602-12770 bp Feature: domain Description: HTH_XRE Location: 1 2602-1 2770 bp Feature: gene Location: 12898-13848 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13036-13582 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3036-1 3582 bp Feature: gene Location: 13845-14546 bp Feature: gene Location: 14918-15511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons

Seq: MFGO01000008.1 Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_34_120 rifoxyd2_full_scaffold_13, whole genome shotgun sequence (206953 bp)
Overview 1 RT 1: 155650-158998 bp Neighborhood of RT #1 [155650, 159009] AbiEii COG5340 RVT-DGRs Fib_succ_major Avd_like Feature: gene Location: 155650-156372 bp Feature: domain Description: AbiEii Location: 155740-156214 bp Feature: domain Description: AbiEii Location: 155740-1562 14 bp Feature: gene Location: 156362-156964 bp Feature: domain Description: COG5340 Location: 156404-156647 bp Feature: domain Description: COG5340 Location: 156404-156647 bp Feature: gene Location: 157008-158076 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 157029-157305 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15702 9-157305 bp Feature: gene Location: 158280-158534 bp Feature: domain Description: Fib_succ_major Location: 158316-158496 bp Feature: domain Description: Fib_succ_major Location: 158316-158496 bp Feature: gene Location: 158668-159009 bp Feature: domain Description: Avd_like Location: 158695-158998 bp Feature: domain Description: Avd_like Location: 158695-158998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-DGRs, Fib_succ_major (TIGR02145), Avd_like (cd16376)