myRT

myRT report for GCA_001778495.1_ASM177849v1

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Seq: MFHE01000010.1 Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_45_24 rifcsphigho2_01_scaffold_583, whole genome shotgun sequence (154117 bp)
Overview 1 RT 1: 119341-125289 bp Neighborhood of RT #1 [119341, 125339] RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like HSDR_N_2 HsdM RVT-Retrons Resolvase Recombinase Zn_ribbon_recom GIY-YIG_SLX1_like Feature: gene Location: 119341-120780 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 119506-120016 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 1 9506-1 2001 6 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 120196-120769 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 1 201 96-1 20769 bp Feature: gene Location: 120752-122539 bp Feature: domain Description: HSDR_N_2 Location: 120875-121223 bp Feature: domain Description: HSDR_N_2 Location: 1 20875-1 21 223 bp Feature: domain Description: HsdM Location: 121553-122537 bp Feature: domain Description: HsdM Location: 1 21 553-1 22537 bp Feature: gene Location: 122565-122792 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122586-122775 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 22586-1 22775 bp Feature: gene Location: 122819-124141 bp Feature: domain Description: Resolvase Location: 122891-123332 bp Feature: domain Description: Resolvase Location: 1 22891 -1 23332 bp Feature: domain Description: Recombinase Location: 123404-123677 bp Feature: domain Description: Recombinase Location: 1 23404-1 23677 bp Feature: domain Description: Zn_ribbon_recom Location: 123713-123887 bp Feature: domain Description: Zn_ribbon_recom Location: 1 2371 3-1 23887 bp Feature: gene Location: 125079-125339 bp Feature: domain Description: GIY-YIG_SLX1_like Location: 125121-125289 bp Feature: domain Description: GIY-YIG_SLX1 _like Location: 1 251 21 -1 25289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_SonII-TRD2-CR2_like (cd17246), HSDR_N_2 (pfam13588), HsdM (COG0286), RVT-Retrons, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), GIY-YIG_SLX1_like (cd10449)