myRT

myRT report for GCA_001778515.1_ASM177851v1

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Seq: MFHH01000043.1 Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_42_15 rifcsphigho2_02_sub10_scaffold_495, whole genome shotgun sequence (14417 bp)
Overview 1 RT 1: 12096-14394 bp Neighborhood of RT #1 [12096, 14394] AdaB Ap4A_hydrolase_human_like RVT-DGRs Avd_like Feature: gene Location: 12096-12383 bp Feature: domain Description: AdaB Location: 12123-12378 bp Feature: domain Description: AdaB Location: 1 21 23-1 2378 bp Feature: gene Location: 12361-12837 bp Feature: domain Description: Ap4A_hydrolase_human_like Location: 12415-12811 bp Feature: domain Description: Ap4A_hydrolase_human_like Location: 1 241 5-1 281 1 bp Feature: gene Location: 12797-13831 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13076-13679 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 3076-1 3679 bp Feature: gene Location: 13811-14149 bp Feature: domain Description: Avd_like Location: 13817-14108 bp Feature: domain Description: Avd_like Location: 1 381 7-1 41 08 bp Feature: gene Location: 14146-14394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AdaB (COG0350), Ap4A_hydrolase_human_like (cd03428), RVT-DGRs, Avd_like (cd16376)

Seq: MFHH01000013.1 Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_42_15 rifcsphigho2_02_sub10_scaffold_1345, whole genome shotgun sequence (13276 bp)
Overview 1 RT 1: 1-3626 bp Neighborhood of RT #1 [1, 3626] PliI_like PliI_like RVT-Retrons RVT-Retrons AhpC Feature: gene Location: 1-690 bp Feature: domain Description: PliI_like Location: 160-277 bp Feature: domain Description: PliI_like Location: 160-2 77 bp Feature: domain Description: PliI_like Location: 403-469 bp Feature: domain Description: PliI_like Location: 403-469 bp Feature: gene Location: 938-1165 bp Feature: gene Location: 1171-2319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1324-1489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 4-1489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1555-1909 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1555-1909 bp Feature: gene Location: 2489-3076 bp Feature: domain Description: AhpC Location: 2501-3056 bp Feature: domain Description: AhpC Location: 2 501-3056 bp Feature: gene Location: 3138-3626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PliI_like (cl15236), AhpC (TIGR03137)