myRT

myRT report for GCA_001780285.1_ASM178028v1

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Seq: MFGN01000005.1 Candidatus Falkowbacteria bacterium RIFOXYD12_FULL_34_57 rifoxyd3_full_scaffold_14, whole genome shotgun sequence (207050 bp)
Overview 1 RT 1: 48048-51249 bp Neighborhood of RT #1 [48048, 51407] Avd_like Fib_succ_major RVT-DGRs COG5340 AbiEii Feature: gene Location: 48048-48389 bp Feature: domain Description: Avd_like Location: 48075-48378 bp Feature: domain Description: Avd_like Location: 48075-48378 bp Feature: gene Location: 48523-48777 bp Feature: domain Description: Fib_succ_major Location: 48559-48739 bp Feature: domain Description: Fib_succ_major Location: 48559-48739 bp Feature: gene Location: 48981-50049 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49002-49278 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49002-49278 bp Feature: gene Location: 50093-50695 bp Feature: domain Description: COG5340 Location: 50135-50378 bp Feature: domain Description: COG5340 Location: 501 35-50378 bp Feature: gene Location: 50685-51407 bp Feature: domain Description: AbiEii Location: 50775-51249 bp Feature: domain Description: AbiEii Location: 50775-51 249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), Fib_succ_major (TIGR02145), RVT-DGRs, COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843)

Seq: MFGN01000024.1 Candidatus Falkowbacteria bacterium RIFOXYD12_FULL_34_57 rifoxyd3_full_scaffold_404, whole genome shotgun sequence (28047 bp)
Overview 1 RT 1: 12326-15500 bp Neighborhood of RT #1 [12326, 15500] HTH_XRE RVT-Retrons Feature: gene Location: 12326-12616 bp Feature: gene Location: 12579-12887 bp Feature: domain Description: HTH_XRE Location: 12591-12759 bp Feature: domain Description: HTH_XRE Location: 12 591-12 759 bp Feature: gene Location: 12887-13837 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13025-13571 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1302 5-13571 bp Feature: gene Location: 13834-14535 bp Feature: gene Location: 14907-15500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons