myRT

myRT report for GCA_001780675.1_ASM178067v1

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Seq: MFIF01000014.1 Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_46_32 rifcsplowo2_01_scaffold_4626, whole genome shotgun sequence (33620 bp)
Overview 1 RT 1: 28346-33586 bp Neighborhood of RT #1 [28346, 33620] GIY-YIG_SLX1_like Resolvase Recombinase Zn_ribbon_recom RVT-Retrons HSDR_N_2 HsdM RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Feature: gene Location: 28346-28606 bp Feature: domain Description: GIY-YIG_SLX1_like Location: 28388-28556 bp Feature: domain Description: GIY-YIG_SLX1 _like Location: 28388-28556 bp Feature: gene Location: 29544-30866 bp Feature: domain Description: Resolvase Location: 29616-30057 bp Feature: domain Description: Resolvase Location: 2961 6-30057 bp Feature: domain Description: Recombinase Location: 30129-30402 bp Feature: domain Description: Recombinase Location: 301 29-30402 bp Feature: domain Description: Zn_ribbon_recom Location: 30438-30612 bp Feature: domain Description: Zn_ribbon_recom Location: 30438-3061 2 bp Feature: gene Location: 30893-31120 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30914-31103 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3091 4-31 1 03 bp Feature: gene Location: 31146-32933 bp Feature: domain Description: HSDR_N_2 Location: 31269-31617 bp Feature: domain Description: HSDR_N_2 Location: 31 269-31 61 7 bp Feature: domain Description: HsdM Location: 31947-32931 bp Feature: domain Description: HsdM Location: 31 947-32931 bp Feature: gene Location: 32905-33620 bp Feature: domain Description: RMtype1_S_EcoKI_StySPI-TRD2-CR2_like Location: 33067-33586 bp Feature: domain Description: RMtype1 _S_EcoKI_StySPI-TRD2-CR2_like Location: 33067-33586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG_SLX1_like (cd10449), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-Retrons, HSDR_N_2 (pfam13588), HsdM (COG0286), RMtype1_S_EcoKI_StySPI-TRD2-CR2_like (cd17517)

Seq: MFIF01000003.1 Candidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_46_32 rifcsplowo2_01_scaffold_1347, whole genome shotgun sequence (48989 bp)
Overview 1 RT 1: 20162-23931 bp Neighborhood of RT #1 [20162, 23931] PAP2_BcrC_like FolD RVT-DGRs Avd_like Feature: gene Location: 20162-20623 bp Feature: domain Description: PAP2_BcrC_like Location: 20174-20588 bp Feature: domain Description: PAP2 _BcrC_like Location: 2 0174-2 0588 bp Feature: gene Location: 20620-21435 bp Feature: domain Description: FolD Location: 20623-21427 bp Feature: domain Description: FolD Location: 2 062 3-2 142 7 bp Feature: gene Location: 21432-22418 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21645-22260 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 1645-2 2 2 60 bp Feature: gene Location: 22486-22815 bp Feature: domain Description: Avd_like Location: 22492-22768 bp Feature: domain Description: Avd_like Location: 2 2 492 -2 2 768 bp Feature: gene Location: 23287-23931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_BcrC_like (cd03385), FolD (COG0190), RVT-DGRs, Avd_like (cd16376)