myRT

myRT report for GCA_001785695.1_ASM178569v1

Download annotations/find similar RTs

Seq: MFUK01000015.1 Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_40_64 rifcsphigho2_12_scaffold_30557, whole genome shotgun sequence (5682 bp)
Overview 1 RT 1: 1-3612 bp Neighborhood of RT #1 [1, 3617] RVT-DGRs PRK05755 PRK05755 STE14 Feature: gene Location: 1-208 bp Feature: gene Location: 193-636 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 199-487 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 99-487 bp Feature: gene Location: 645-3122 bp Feature: domain Description: PRK05755 Location: 663-1656 bp Feature: domain Description: PRK05755 Location: 663-1 656 bp Feature: domain Description: PRK05755 Location: 1809-3120 bp Feature: domain Description: PRK05755 Location: 1 809-31 20 bp Feature: gene Location: 3147-3617 bp Feature: domain Description: STE14 Location: 3186-3612 bp Feature: domain Description: STE1 4 Location: 31 86-361 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: MFUK01000006.1 Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_40_64 rifcsphigho2_12_scaffold_1572, whole genome shotgun sequence (33432 bp)
Overview 1 RT 1: 2529-7804 bp Neighborhood of RT #1 [2529, 7804] DUF1566 Avd_like RVT-DGRs Transposase_20 Feature: gene Location: 2529-3887 bp Feature: domain Description: DUF1566 Location: 3516-3876 bp Feature: domain Description: DUF1566 Location: 3516-3876 bp Feature: gene Location: 3961-4323 bp Feature: domain Description: Avd_like Location: 3988-4294 bp Feature: domain Description: Avd_like Location: 3988-42 94 bp Feature: gene Location: 4655-5935 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4907-5585 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4907-5585 bp Feature: gene Location: 6168-6629 bp Feature: domain Description: Transposase_20 Location: 6261-6513 bp Feature: domain Description: Transposase_2 0 Location: 62 61-6513 bp Feature: gene Location: 7202-7804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Transposase_20 (pfam02371)

Seq: MFUK01000035.1 Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_12_FULL_40_64 rifcsphigho2_12_scaffold_96, whole genome shotgun sequence (117967 bp)
Overview 1 RT 1: 62361-66848 bp Neighborhood of RT #1 [62361, 66853] Avd_like RVT-DGRs Hit recJ Feature: gene Location: 62361-62756 bp Feature: gene Location: 63258-63488 bp Feature: domain Description: Avd_like Location: 63261-63456 bp Feature: domain Description: Avd_like Location: 63 261-63 456 bp Feature: gene Location: 63634-64644 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63841-64492 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63 841-64492 bp Feature: gene Location: 64672-65127 bp Feature: domain Description: Hit Location: 64678-65119 bp Feature: domain Description: Hit Location: 64678-65119 bp Feature: gene Location: 65168-66853 bp Feature: domain Description: recJ Location: 65183-66848 bp Feature: domain Description: recJ Location: 65183 -66848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Hit (COG0537), recJ (TIGR00644)