myRT

myRT report for GCA_001786395.1_ASM178639v1

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Seq: MFWN01000030.1 Candidatus Pacearchaeota archaeon RBG_13_36_9 RBG_13_scaffold_16458, whole genome shotgun sequence (7440 bp)
Overview 1 RT 1: 1-7227 bp Neighborhood of RT #1 [1, 7227] COG1373 RVT-DGRs HTH_40 Feature: gene Location: 1-992 bp Feature: gene Location: 1051-2367 bp Feature: domain Description: COG1373 Location: 1132-2353 bp Feature: domain Description: COG1 373 Location: 1 1 32-2353 bp Feature: gene Location: 3168-4604 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3378-3993 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3378-3993 bp Feature: domain Description: HTH_40 Location: 4284-4545 bp Feature: domain Description: HTH_40 Location: 4284-4545 bp Feature: gene Location: 4927-5841 bp Feature: gene Location: 5848-7227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HTH_40 (pfam14493)

Seq: MFWN01000040.1 Candidatus Pacearchaeota archaeon RBG_13_36_9 RBG_13_scaffold_20833, whole genome shotgun sequence (5955 bp)
Overview 1 RT 1: 1-4204 bp Neighborhood of RT #1 [1, 4221] RVT-DGRs RVT-DGRs SDR_c Feature: gene Location: 1-242 bp Feature: gene Location: 676-1278 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 883-1207 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 883-12 07 bp Feature: gene Location: 1275-1598 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1278-1362 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 78-1362 bp Feature: gene Location: 1595-3475 bp Feature: gene Location: 3484-4221 bp Feature: domain Description: SDR_c Location: 3511-4204 bp Feature: domain Description: SDR_c Location: 3511-42 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, SDR_c (cd05233)

Seq: MFWN01000063.1 Candidatus Pacearchaeota archaeon RBG_13_36_9 RBG_13_scaffold_4009, whole genome shotgun sequence (12970 bp)
Overview 1 RT 1: 5962-10470 bp Neighborhood of RT #1 [5962, 10470] UbiE RVT-Retrons ELP3 Feature: gene Location: 5962-6372 bp Feature: gene Location: 6400-7116 bp Feature: domain Description: UbiE Location: 6481-6925 bp Feature: domain Description: UbiE Location: 6481-6925 bp Feature: gene Location: 7167-8255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7473-8052 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7473 -8052 bp Feature: gene Location: 8301-9653 bp Feature: domain Description: ELP3 Location: 8307-9645 bp Feature: domain Description: ELP3 Location: 83 07-9645 bp Feature: gene Location: 9655-10470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UbiE (COG2226), RVT-Retrons, ELP3 (TIGR01211)