myRT

myRT report for GCA_001788415.1_ASM178841v1

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Seq: MGBV01000190.1 Candidatus Rokubacteria bacterium GWC2_70_16 gwc2_scaffold_36696, whole genome shotgun sequence (6397 bp)
Overview 1 RT 1: 1-4398 bp Neighborhood of RT #1 [1, 4445] RVT-GII GIIM Exosortase_EpsH Feature: gene Location: 1-220 bp Feature: gene Location: 495-1847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 789-1449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 789-1 449 bp Feature: domain Description: GIIM Note: maturase Location: 1521-1719 bp Feature: domain Description: GIIM Note: maturase Location: 1 521 -1 71 9 bp Feature: gene Location: 2481-3113 bp Feature: gene Location: 3609-4445 bp Feature: domain Description: Exosortase_EpsH Location: 3648-4398 bp Feature: domain Description: Exosortase_EpsH Location: 3648-4398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exosortase_EpsH (pfam09721), RVT-GII, GIIM (pfam08388)

Seq: MGBV01000175.1 Candidatus Rokubacteria bacterium GWC2_70_16 gwc2_scaffold_32581, whole genome shotgun sequence (9185 bp)
Overview 1 RT 1: 2078-8063 bp Neighborhood of RT #1 [2078, 8083] PadR 2A51 RVT-GII GIIM HAD_PGPase PRK13342 Feature: gene Location: 2078-2452 bp Feature: domain Description: PadR Location: 2120-2327 bp Feature: domain Description: PadR Location: 2 12 0-2 32 7 bp Feature: gene Location: 2497-3711 bp Feature: domain Description: 2A51 Location: 2566-3676 bp Feature: domain Description: 2 A51 Location: 2 566-3676 bp Feature: gene Location: 3882-5213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4176-4836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4176-4836 bp Feature: domain Description: GIIM Note: maturase Location: 4905-5124 bp Feature: domain Description: GIIM Note: maturase Location: 4905-512 4 bp Feature: gene Location: 6081-6716 bp Feature: domain Description: HAD_PGPase Location: 6105-6696 bp Feature: domain Description: HAD_PGPase Location: 6105-6696 bp Feature: gene Location: 6740-8083 bp Feature: domain Description: PRK13342 Location: 6791-8063 bp Feature: domain Description: PRK13342 Location: 6791-8063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), 2A51 (TIGR00937), RVT-GII, GIIM (pfam08388), HAD_PGPase (cd16421), PRK13342 (recombination factor protein RarA; Reviewed)

Seq: MGBV01000260.1 Candidatus Rokubacteria bacterium GWC2_70_16 gwc2_scaffold_6762, whole genome shotgun sequence (11889 bp)
Overview 1 RT 1: 6681-10426 bp Neighborhood of RT #1 [6681, 10497] SIRT7 Zn_ADH_class_III RVT-GII GIIM Feature: gene Location: 6681-7421 bp Feature: domain Description: SIRT7 Location: 6723-7386 bp Feature: domain Description: SIRT7 Location: 6723 -73 86 bp Feature: gene Location: 7428-8522 bp Feature: domain Description: Zn_ADH_class_III Location: 7431-8514 bp Feature: domain Description: Zn_ADH_class_III Location: 743 1-8514 bp Feature: gene Location: 9211-10497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9496-10135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9496-1013 5 bp Feature: domain Description: GIIM Note: maturase Location: 10210-10426 bp Feature: domain Description: GIIM Note: maturase Location: 10210-10426 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIRT7 (cd01410), Zn_ADH_class_III (cd08279), RVT-GII, GIIM (pfam08388)