myRT

myRT report for GCA_001788485.1_ASM178848v1

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Seq: MGCD01000025.1 Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_71_18 rifcsplowo2_02_scaffold_168969, whole genome shotgun sequence (5413 bp)
Overview 1 RT 1: 1-5403 bp Neighborhood of RT #1 [1, 5413] COG4585 RVT-GII PinE Zn_ribbon_recom RVT-GII GIIM COG3547 Feature: gene Location: 1-189 bp Feature: domain Description: COG4585 Location: 16-190 bp Feature: domain Description: COG4585 Location: 1 6-1 90 bp Feature: gene Location: 910-1428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195-1429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 95-1 429 bp Feature: gene Location: 1452-3667 bp Feature: domain Description: PinE Location: 1500-2085 bp Feature: domain Description: PinE Location: 1 500-2085 bp Feature: domain Description: Zn_ribbon_recom Location: 2445-2610 bp Feature: domain Description: Zn_ribbon_recom Location: 2445-261 0 bp Feature: gene Location: 4152-4937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4164-4575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 64-4575 bp Feature: domain Description: GIIM Note: maturase Location: 4650-4869 bp Feature: domain Description: GIIM Note: maturase Location: 4650-4869 bp Feature: gene Location: 5142-5413 bp Feature: domain Description: COG3547 Location: 5154-5403 bp Feature: domain Description: COG3547 Location: 51 54-5403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4585 (Signal transduction histidine kinase ), RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), GIIM (pfam08388), COG3547 (Transposase )