myRT

myRT report for GCA_001789215.1_ASM178921v1

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Seq: MFYU01000048.1 Candidatus Raymondbacteria bacterium RifOxyB12_full_50_8 rifoxyb3_full_scaffold_1401, whole genome shotgun sequence (11762 bp)
Overview 1 RT 1: 3163-7616 bp Neighborhood of RT #1 [3163, 7651] CopG_antitoxin RVT-GII RVT-GII GIIM BrnT_toxin Feature: gene Location: 3163-3489 bp Ori: OGK02191.1 Feature: domain Description: CopG_antitoxin Location: 3181-3415 bp Feature: domain Description: CopG_antitoxin Location: 31 81 -341 5 bp Feature: gene Location: 3820-4002 bp Feature: gene Location: 4669-5917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4873-5254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4873-5254 bp Feature: gene Location: 5928-6686 bp Ori: OGK02193.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5997-6141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5997-61 41 bp Feature: domain Description: GIIM Note: maturase Location: 6201-6432 bp Feature: domain Description: GIIM Note: maturase Location: 6201 -6432 bp Feature: gene Location: 6759-7064 bp Feature: gene Location: 7352-7651 bp Ori: OGK02195.1 Feature: domain Description: BrnT_toxin Location: 7376-7616 bp Feature: domain Description: BrnT_toxin Location: 7376-761 6 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MFYU01000036.1 Candidatus Raymondbacteria bacterium RifOxyB12_full_50_8 rifoxyb3_full_scaffold_1286, whole genome shotgun sequence (18377 bp)
Overview 1 RT 1: 10202-17791 bp Neighborhood of RT #1 [10202, 18243] Dcm NotI RVT_N RVT-GII GIIM CarboxypepD_reg CarboxypepD_reg GH43_62_32_68_117_130-like GH43_62_32_68_117_130-like GH43_62_32_68_117_130-like Feature: gene Location: 10202-11332 bp Ori: OGK02856.1 Feature: domain Description: Dcm Location: 10205-11306 bp Feature: domain Description: Dcm Location: 102 05-11306 bp Feature: gene Location: 11508-12140 bp Ori: OGK02857.1 Feature: domain Description: NotI Location: 11520-12015 bp Feature: domain Description: NotI Location: 1152 0-12 015 bp Feature: gene Location: 12950-14458 bp Ori: OGK02858.1 Feature: domain Description: RVT_N Location: 13001-13241 bp Feature: domain Description: RVT_N Location: 13001-132 41 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13289-13910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 89-13910 bp Feature: domain Description: GIIM Note: maturase Location: 13985-14198 bp Feature: domain Description: GIIM Note: maturase Location: 13985-14198 bp Feature: gene Location: 14634-16043 bp Ori: OGK02859.1 Feature: domain Description: CarboxypepD_reg Location: 14715-14907 bp Feature: domain Description: CarboxypepD_reg Location: 14715-14907 bp Feature: domain Description: CarboxypepD_reg Location: 15042-15225 bp Feature: domain Description: CarboxypepD_reg Location: 15042 -152 2 5 bp Feature: gene Location: 16243-18243 bp Ori: OGK02860.1 Feature: domain Description: GH43_62_32_68_117_130-like Location: 16861-16954 bp Feature: domain Description: GH43_62 _32 _68_117_130-like Location: 16861-16954 bp Feature: domain Description: GH43_62_32_68_117_130-like Location: 17332-17413 bp Feature: domain Description: GH43_62 _32 _68_117_130-like Location: 17332 -17413 bp Feature: domain Description: GH43_62_32_68_117_130-like Location: 17689-17791 bp Feature: domain Description: GH43_62 _32 _68_117_130-like Location: 17689-17791 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MFYU01000060.1 Candidatus Raymondbacteria bacterium RifOxyB12_full_50_8 rifoxyb3_full_scaffold_1561, whole genome shotgun sequence (14283 bp)
Overview 1 RT 1: 1-4671 bp Neighborhood of RT #1 [1, 4766] RVT-GII GIIM PIN_VapC-like Feature: gene Location: 1-794 bp Feature: gene Location: 796-1590 bp Feature: gene Location: 2144-3454 bp Ori: OGK01756.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2447-3071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2447-3 071 bp Feature: domain Description: GIIM Note: maturase Location: 3143-3353 bp Feature: domain Description: GIIM Note: maturase Location: 3 143 -3 3 53 bp Feature: gene Location: 4087-4266 bp Feature: gene Location: 4269-4766 bp Ori: OGK01758.1 Feature: domain Description: PIN_VapC-like Location: 4284-4671 bp Feature: domain Description: PIN_VapC-like Location: 4284-4671 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MFYU01000135.1 Candidatus Raymondbacteria bacterium RifOxyB12_full_50_8 rifoxyb3_full_scaffold_2406, whole genome shotgun sequence (6813 bp)
Overview 1 RT 1: 1-5276 bp Neighborhood of RT #1 [1, 5290] RVT-DGRs Avd_like sensory_box CHD STKc_PknB_like STKc_PknB_like FGE-sulfatase Feature: gene Location: 1-565 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 208-511 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 208-511 bp Feature: gene Location: 562-903 bp Ori: OGJ98712.1 Feature: domain Description: Avd_like Location: 583-895 bp Feature: domain Description: Avd_like Location: 583-895 bp Feature: gene Location: 977-5290 bp Ori: OGJ98713.1 Feature: domain Description: sensory_box Location: 1139-1445 bp Feature: domain Description: sensory_box Location: 1139-14 4 5 bp Feature: domain Description: CHD Location: 1532-2081 bp Feature: domain Description: CHD Location: 1532-2081 bp Feature: domain Description: STKc_PknB_like Location: 2174-2456 bp Feature: domain Description: STKc_PknB_like Location: 2174 -24 56 bp Feature: domain Description: STKc_PknB_like Location: 2579-3089 bp Feature: domain Description: STKc_PknB_like Location: 2579-3089 bp Feature: domain Description: FGE-sulfatase Location: 4553-5276 bp Feature: domain Description: FGE-sulfatase Location: 4 553-5276 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: MFYU01000067.1 Candidatus Raymondbacteria bacterium RifOxyB12_full_50_8 rifoxyb3_full_scaffold_1627, whole genome shotgun sequence (8825 bp)
Overview 1 RT 1: 987-5039 bp Neighborhood of RT #1 [987, 5170] COG4447 COG4447 RVT-GII GIIM PIN_VapC-like AcrR Feature: gene Location: 987-2009 bp Ori: OGK01286.1 Feature: domain Description: COG4447 Location: 1164-1494 bp Feature: domain Description: COG4447 Location: 1164-1494 bp Feature: domain Description: COG4447 Location: 1800-1995 bp Feature: domain Description: COG4447 Location: 1800-1995 bp Feature: gene Location: 2226-2615 bp Feature: gene Location: 2753-3412 bp Ori: OGK01288.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2759-2864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275 9-2864 bp Feature: domain Description: GIIM Note: maturase Location: 2948-3152 bp Feature: domain Description: GIIM Note: maturase Location: 2948-315 2 bp Feature: gene Location: 3806-4276 bp Ori: OGK01289.1 Feature: domain Description: PIN_VapC-like Location: 3854-4202 bp Feature: domain Description: PIN_VapC-like Location: 385 4-4202 bp Feature: gene Location: 4484-5170 bp Ori: OGK01290.1 Feature: domain Description: AcrR Location: 4556-5039 bp Feature: domain Description: AcrR Location: 45 5 6-5 039 bp Sorry, your browser does not support inline SVG.
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