myRT

myRT report for GCA_001794715.1_ASM179471v1

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Seq: MGKM01000010.1 Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_88 rifcsplowo2_01_scaffold_3388, whole genome shotgun sequence (70512 bp)
Overview 1 RT 1: 2905-10823 bp 2 RT 2: 49783-54846 bp Neighborhood of RT #1 [2905, 11227] rpoB PRK00566 RVT-Retrons Neighborhood of RT #2 [49783, 54846] Resolvase Recombinase Zn_ribbon_recom RVT-DGRs Avd_like Feature: gene Location: 2905-6060 bp Feature: domain Description: rpoB Location: 2914-6055 bp Feature: domain Description: rpoB Location: 291 4-6055 bp Feature: gene Location: 6215-9793 bp Feature: domain Description: PRK00566 Location: 6224-9755 bp Feature: domain Description: PRK00566 Location: 6224-9755 bp Feature: gene Location: 9914-11227 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10235-10823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0235-1 0823 bp Feature: gene Location: 49783-50496 bp Feature: gene Location: 50468-51805 bp Feature: domain Description: Resolvase Location: 50540-50981 bp Feature: domain Description: Resolvase Location: 50540-50981 bp Feature: domain Description: Recombinase Location: 51053-51326 bp Feature: domain Description: Recombinase Location: 51 053-51 326 bp Feature: domain Description: Zn_ribbon_recom Location: 51362-51539 bp Feature: domain Description: Zn_ribbon_recom Location: 51 362-51 539 bp Feature: gene Location: 52047-53099 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52254-52884 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52254-52884 bp Feature: gene Location: 53088-53468 bp Feature: domain Description: Avd_like Location: 53136-53451 bp Feature: domain Description: Avd_like Location: 531 36-53451 bp Feature: gene Location: 54019-54846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-Retrons, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-DGRs, Avd_like (cd16376)

Seq: MGKM01000009.1 Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_88 rifcsplowo2_01_scaffold_2947, whole genome shotgun sequence (40235 bp)
Overview 1 RT 1: 20002-23271 bp Neighborhood of RT #1 [20002, 23271] DegQ Mpg Mpg RVT-DGRs Avd_like Feature: gene Location: 20002-21045 bp Feature: domain Description: DegQ Location: 20035-21037 bp Feature: domain Description: DegQ Location: 2 0035-2 1037 bp Feature: gene Location: 21057-21551 bp Feature: domain Description: Mpg Location: 21063-21366 bp Feature: domain Description: Mpg Location: 2 1063-2 1366 bp Feature: domain Description: Mpg Location: 21366-21549 bp Feature: domain Description: Mpg Location: 2 1366-2 1549 bp Feature: gene Location: 21674-22726 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21884-22511 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 1884-2 2 511 bp Feature: gene Location: 22730-23080 bp Feature: domain Description: Avd_like Location: 22754-23069 bp Feature: domain Description: Avd_like Location: 2 2 754-2 3069 bp Feature: gene Location: 23077-23271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), Mpg (COG2094), RVT-DGRs, Avd_like (cd16376)