myRT

myRT report for GCA_001794755.1_ASM179475v1

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Seq: MGKT01000004.1 Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_44_18 rifcsplowo2_02_scaffold_478, whole genome shotgun sequence (58418 bp)
Overview 1 RT 1: 38186-41455 bp Neighborhood of RT #1 [38186, 41455] DegQ Mpg Mpg RVT-DGRs Avd_like Feature: gene Location: 38186-39229 bp Feature: domain Description: DegQ Location: 38219-39221 bp Feature: domain Description: DegQ Location: 3821 9-39221 bp Feature: gene Location: 39241-39735 bp Feature: domain Description: Mpg Location: 39247-39550 bp Feature: domain Description: Mpg Location: 39247-39550 bp Feature: domain Description: Mpg Location: 39550-39733 bp Feature: domain Description: Mpg Location: 39550-39733 bp Feature: gene Location: 39858-40910 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40068-40695 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40068-40695 bp Feature: gene Location: 40914-41264 bp Feature: domain Description: Avd_like Location: 40938-41253 bp Feature: domain Description: Avd_like Location: 40938-41 253 bp Feature: gene Location: 41261-41455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), Mpg (COG2094), RVT-DGRs, Avd_like (cd16376)

Seq: MGKT01000002.1 Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_02_FULL_44_18 rifcsplowo2_02_scaffold_262, whole genome shotgun sequence (122024 bp)
Overview 1 RT 1: 54636-62554 bp 2 RT 2: 101459-106522 bp Neighborhood of RT #1 [54636, 62958] rpoB PRK00566 RVT-Retrons Neighborhood of RT #2 [101459, 106522] Resolvase Recombinase Zn_ribbon_recom RVT-DGRs Avd_like Feature: gene Location: 54636-57791 bp Feature: domain Description: rpoB Location: 54645-57786 bp Feature: domain Description: rpoB Location: 54645-57786 bp Feature: gene Location: 57946-61524 bp Feature: domain Description: PRK00566 Location: 57955-61486 bp Feature: domain Description: PRK00566 Location: 57955-61486 bp Feature: gene Location: 61645-62958 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61966-62554 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61966-62 554 bp Feature: gene Location: 101459-102172 bp Feature: gene Location: 102144-103481 bp Feature: domain Description: Resolvase Location: 102216-102657 bp Feature: domain Description: Resolvase Location: 102 2 16-102 657 bp Feature: domain Description: Recombinase Location: 102729-103002 bp Feature: domain Description: Recombinase Location: 102 72 9-103002 bp Feature: domain Description: Zn_ribbon_recom Location: 103038-103215 bp Feature: domain Description: Zn_ribbon_recom Location: 103038-1032 15 bp Feature: gene Location: 103723-104775 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 103930-104560 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 103930-104560 bp Feature: gene Location: 104764-105144 bp Feature: domain Description: Avd_like Location: 104812-105127 bp Feature: domain Description: Avd_like Location: 104812 -10512 7 bp Feature: gene Location: 105695-106522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-Retrons, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-DGRs, Avd_like (cd16376)