myRT

myRT report for GCA_001795115.1_ASM179511v1

Download annotations/find similar RTs

Seq: MGNI01000160.1 Chloroflexi bacterium RBG_16_48_8 RBG_16_scaffold_4791, whole genome shotgun sequence (28730 bp)
Overview 1 RT 1: 25006-28390 bp Neighborhood of RT #1 [25006, 28449] Tn7_Tnp_TnsA_N Phage_integrase RVT-GII Feature: gene Location: 25006-25665 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 25144-25363 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 251 44-25363 bp Feature: gene Location: 26555-27004 bp Feature: domain Description: Phage_integrase Location: 26624-26972 bp Feature: domain Description: Phage_integrase Location: 26624-26972 bp Feature: gene Location: 27574-28449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27841-28390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27841 -28390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tn7_Tnp_TnsA_N (pfam08722), Phage_integrase (pfam00589), RVT-GII

Seq: MGNI01000210.1 Chloroflexi bacterium RBG_16_48_8 RBG_16_scaffold_8183, whole genome shotgun sequence (18263 bp)
Overview 1 RT 1: 11190-18263 bp Neighborhood of RT #1 [11190, 18263] PleD TadE RVT-GII Feature: gene Location: 11190-12149 bp Feature: domain Description: PleD Location: 11217-12111 bp Feature: domain Description: PleD Location: 112 17-12 111 bp Feature: gene Location: 12531-14654 bp Feature: domain Description: TadE Location: 12570-12696 bp Feature: domain Description: TadE Location: 12 570-12 696 bp Feature: gene Location: 15196-15777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15412-15772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15412 -15772 bp Feature: gene Location: 16541-18263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PleD (COG3706), TadE (pfam07811), RVT-GII

Seq: MGNI01000109.1 Chloroflexi bacterium RBG_16_48_8 RBG_16_scaffold_2935, whole genome shotgun sequence (34930 bp)
Overview 1 RT 1: 30107-34931 bp Neighborhood of RT #1 [30107, 34930] GIIM RVT-GII GIIM RVT-GII COG3666 Feature: gene Location: 30107-30520 bp Feature: domain Description: GIIM Note: maturase Location: 30140-30317 bp Feature: domain Description: GIIM Note: maturase Location: 3 0140-3 03 17 bp Feature: gene Location: 30533-30729 bp Feature: gene Location: 30806-31844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30854-31511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 0854-3 1511 bp Feature: domain Description: GIIM Note: maturase Location: 31592-31823 bp Feature: domain Description: GIIM Note: maturase Location: 3 1592-3 1823 bp Feature: gene Location: 32589-33311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32874-33288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2874-3 3 288 bp Feature: gene Location: 33664-33891 bp Feature: gene Location: 34646-34930 bp Feature: domain Description: COG3666 Location: 34655-34931 bp Feature: domain Description: COG3 666 Location: 3 4655-3 493 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, COG3666 (Transposase )