myRT

myRT report for GCA_001796945.1_ASM179694v1

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Seq: MGNY01000185.1 Chloroflexi bacterium RBG_16_63_12 RBG_16_scaffold_54928, whole genome shotgun sequence (6192 bp)
Overview 1 RT 1: 259-5616 bp Neighborhood of RT #1 [259, 5615] RVT-GII GIIM PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII Feature: gene Location: 259-706 bp Feature: gene Location: 1717-2369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1729-2113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 729-21 1 3 bp Feature: domain Description: GIIM Note: maturase Location: 2224-2368 bp Feature: domain Description: GIIM Note: maturase Location: 2224-2368 bp Feature: gene Location: 2860-5079 bp Feature: domain Description: PinE Location: 2908-3499 bp Feature: domain Description: PinE Location: 2908-3499 bp Feature: domain Description: Zn_ribbon_recom Location: 3853-4021 bp Feature: domain Description: Zn_ribbon_recom Location: 3853-4021 bp Feature: domain Description: HTH_17 Location: 4747-4861 bp Feature: domain Description: HTH_1 7 Location: 4747-4861 bp Feature: domain Description: HTH_17 Location: 4942-5038 bp Feature: domain Description: HTH_1 7 Location: 4942-5038 bp Feature: gene Location: 5109-5615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5385-5616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5385-561 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728)

Seq: MGNY01000018.1 Chloroflexi bacterium RBG_16_63_12 RBG_16_scaffold_117287, whole genome shotgun sequence (8113 bp)
Overview 1 RT 1: 1-3025 bp Neighborhood of RT #1 [1, 3210] RVT-Retrons Methyltransf_25 SmtA Feature: gene Location: 1-338 bp Feature: gene Location: 576-1463 bp Ori: OGO49989.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 723-1284 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 72 3-12 84 bp Feature: gene Location: 1531-2349 bp Ori: OGO49990.1 Feature: domain Description: Methyltransf_25 Location: 1696-1978 bp Feature: domain Description: Methyltransf_2 5 Location: 1696-1978 bp Feature: gene Location: 2506-3210 bp Ori: OGO49991.1 Feature: domain Description: SmtA Location: 2599-3025 bp Feature: domain Description: SmtA Location: 2 599-302 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Methyltransf_25 (pfam13649), SmtA (COG0500)