myRT

myRT report for GCA_001797165.1_ASM179716v1

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Seq: MGOQ01000592.1 Chloroflexi bacterium RIFOXYD12_FULL_57_15 rifoxyd3_full_scaffold_3849_curated, whole genome shotgun sequence (5121 bp)
Overview 1 RT 1: 297-4360 bp Neighborhood of RT #1 [297, 4455] COG4585 CitB RVT-GII GIIM Feature: gene Location: 297-2348 bp Feature: domain Description: COG4585 Location: 1053-2286 bp Feature: domain Description: COG4585 Location: 1 053-2286 bp Feature: gene Location: 2396-3034 bp Ori: OGO75779.1 Feature: domain Description: CitB Location: 2405-3017 bp Feature: domain Description: CitB Location: 2405-301 7 bp Feature: gene Location: 3148-4455 bp Ori: OGO75780.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3403-4072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3403-4072 bp Feature: domain Description: GIIM Note: maturase Location: 4144-4360 bp Feature: domain Description: GIIM Note: maturase Location: 41 44-4360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4585 (Signal transduction histidine kinase ), CitB (TIGR02484), RVT-GII, GIIM (pfam08388)

Seq: MGOQ01000398.1 Chloroflexi bacterium RIFOXYD12_FULL_57_15 rifoxyd3_full_scaffold_2679_curated, whole genome shotgun sequence (5693 bp)
Overview 1 RT 1: 351-5596 bp Neighborhood of RT #1 [351, 5596] COG5421 RVT-GII Intron_maturas2 HNHc DUF2958 Feature: gene Location: 351-2078 bp Ori: OGO76838.1 Feature: domain Description: COG5421 Location: 663-1893 bp Feature: domain Description: COG542 1 Location: 663-1893 bp Feature: gene Location: 2403-2975 bp Feature: gene Location: 3281-5095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3542-4337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3542 -4337 bp Feature: domain Description: Intron_maturas2 Location: 4454-4691 bp Feature: domain Description: Intron_maturas2 Location: 4454-4691 bp Feature: domain Description: HNHc Note: nucleases Location: 4871-5054 bp Feature: domain Description: HNHc Note: nucleases Location: 4871-5054 bp Feature: gene Location: 5061-5396 bp Ori: OGO76840.1 Feature: domain Description: DUF2958 Location: 5190-5349 bp Feature: domain Description: DUF2 958 Location: 5190-5349 bp Feature: gene Location: 5393-5596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2958 (pfam11171)

Seq: MGOQ01000136.1 Chloroflexi bacterium RIFOXYD12_FULL_57_15 rifoxyd3_full_scaffold_15616_curated, whole genome shotgun sequence (3545 bp)
Overview 1 RT 1: 1522-3090 bp Neighborhood of RT #1 [1522, 3353] COG2129 COG2129 RVT-GII Feature: gene Location: 1522-2109 bp Ori: OGO80688.1 Feature: domain Description: COG2129 Location: 1543-2098 bp Feature: domain Description: COG2129 Location: 1543 -2098 bp Feature: gene Location: 2181-2513 bp Feature: domain Description: COG2129 Location: 2184-2349 bp Feature: domain Description: COG2129 Location: 2184-23 49 bp Feature: gene Location: 2832-3353 bp Ori: OGO80689.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2898-3090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2898-3 090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2129 (Predicted phosphoesterase, related to the Icc protein ), RVT-GII

Seq: MGOQ01000362.1 Chloroflexi bacterium RIFOXYD12_FULL_57_15 rifoxyd3_full_scaffold_2535_curated, whole genome shotgun sequence (6170 bp)
Overview 1 RT 1: 1-1924 bp Neighborhood of RT #1 [1, 1928] RVT-GII PRK14236 Feature: gene Location: 1-380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-379 bp Feature: gene Location: 984-1211 bp Feature: gene Location: 1192-1928 bp Ori: OGO77491.1 Feature: domain Description: PRK14236 Location: 1210-1924 bp Feature: domain Description: PRK14 236 Location: 1210-1924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK14236 (phosphate transporter ATP-binding protein; Provisional)