myRT

myRT report for GCA_001797235.1_ASM179723v1

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Seq: MGOV01000036.1 Clostridiales bacterium GWD2_32_59 gwd2_scaffold_377, whole genome shotgun sequence (48034 bp)
Overview 1 RT 1: 42628-46594 bp Neighborhood of RT #1 [42628, 47727] PGRP LysM M14_Endopeptidase_I MutS_I Avd_like RVT-DGRs PulG Feature: gene Location: 42628-43899 bp Feature: domain Description: PGRP Location: 42646-42850 bp Feature: domain Description: PGRP Location: 42646-42850 bp Feature: domain Description: LysM Location: 42850-42979 bp Feature: domain Description: LysM Location: 42850-42979 bp Feature: domain Description: M14_Endopeptidase_I Location: 43153-43879 bp Feature: domain Description: M1 4_Endopeptidase_I Location: 431 53-43879 bp Feature: gene Location: 44358-45017 bp Feature: domain Description: MutS_I Location: 44367-44655 bp Feature: domain Description: MutS_I Location: 44367-44655 bp Feature: domain Description: Avd_like Location: 44733-44982 bp Feature: domain Description: Avd_like Location: 44733-44982 bp Feature: gene Location: 45309-46529 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45510-46188 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4551 0-461 88 bp Feature: gene Location: 46417-47727 bp Feature: domain Description: PulG Location: 46423-46594 bp Feature: domain Description: PulG Location: 46423-46594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PGRP (smart00701), LysM (smart00257), M14_Endopeptidase_I (cd06229), MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs, PulG (pfam11773)

Seq: MGOV01000047.1 Clostridiales bacterium GWD2_32_59 gwd2_scaffold_450, whole genome shotgun sequence (30842 bp)
Overview 1 RT 1: 1-3633 bp Neighborhood of RT #1 [1, 3641] RVT-GII CtpA Feature: gene Location: 1-624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256-625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 56-62 5 bp Feature: gene Location: 1498-2400 bp Feature: gene Location: 2445-3641 bp Feature: domain Description: CtpA Location: 2580-3633 bp Feature: domain Description: CtpA Location: 2 580-3633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, CtpA (COG0793)

Seq: MGOV01000026.1 Clostridiales bacterium GWD2_32_59 gwd2_scaffold_2649, whole genome shotgun sequence (10050 bp)
Overview 1 RT 1: 1556-6474 bp Neighborhood of RT #1 [1556, 6474] RVT-GII GIIM HEPN_Toprim_N Feature: gene Location: 1556-1933 bp Feature: gene Location: 1930-2193 bp Feature: gene Location: 3187-4470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3436-4120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 43 6-4120 bp Feature: domain Description: GIIM Note: maturase Location: 4198-4390 bp Feature: domain Description: GIIM Note: maturase Location: 4198-43 90 bp Feature: gene Location: 4611-5855 bp Feature: domain Description: HEPN_Toprim_N Location: 4614-5241 bp Feature: domain Description: HEPN_Toprim_N Location: 4614-5241 bp Feature: gene Location: 5923-6474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HEPN_Toprim_N (pfam18871)