myRT

myRT report for GCA_001798545.1_ASM179854v1

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Seq: MGSQ01000213.1 Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 rifcsplowo2_12_scaffold_41684, whole genome shotgun sequence (5783 bp)
Overview 1 RT 1: 2664-5168 bp Neighborhood of RT #1 [2664, 5245] Acetyltransf_1 DUF1778 RVT-GII GIIM Feature: gene Location: 2664-3197 bp Ori: OGQ76609.1 Feature: domain Description: Acetyltransf_1 Location: 2802-3123 bp Feature: domain Description: Acetyltransf_1 Location: 2802-31 23 bp Feature: gene Location: 3187-3501 bp Ori: OGQ76611.1 Feature: domain Description: DUF1778 Location: 3238-3475 bp Feature: domain Description: DUF1 778 Location: 3238-3475 bp Feature: gene Location: 4001-5245 bp Ori: OGQ76610.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4205-4862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4205-4862 bp Feature: domain Description: GIIM Note: maturase Location: 4943-5168 bp Feature: domain Description: GIIM Note: maturase Location: 4943-51 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), DUF1778 (pfam08681), RVT-GII, GIIM (pfam08388)

Seq: MGSQ01000151.1 Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 rifcsplowo2_12_scaffold_27491, whole genome shotgun sequence (14033 bp)
Overview 1 RT 1: 2852-7238 bp Neighborhood of RT #1 [2852, 7300] PIN_VapC-like RVT-UG13 MarR GlpC Feature: gene Location: 2852-3319 bp Ori: OGQ78940.1 Feature: domain Description: PIN_VapC-like Location: 2864-3242 bp Feature: domain Description: PIN_VapC-like Location: 2 864-32 42 bp Feature: gene Location: 3354-3602 bp Feature: gene Location: 3947-5314 bp Ori: OGQ78942.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 4352-4823 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 4352 -482 3 bp Feature: gene Location: 5522-5974 bp Ori: OGQ78943.1 Feature: domain Description: MarR Location: 5609-5951 bp Feature: domain Description: MarR Location: 5609-5951 bp Feature: gene Location: 6071-7300 bp Ori: OGQ78944.1 Feature: domain Description: GlpC Location: 6167-7238 bp Feature: domain Description: GlpC Location: 6167-72 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC-like (cd18715), RVT-UG13, MarR (pfam01047), GlpC (COG0247)