myRT

myRT report for GCA_001798855.1_ASM179885v1

Download annotations/find similar RTs

Seq: MGQQ01000086.1 Deltaproteobacteria bacterium RBG_16_49_23 RBG_16_scaffold_3241, whole genome shotgun sequence (46235 bp)
Overview 1 RT 1: 9864-14885 bp Neighborhood of RT #1 [9864, 15067] AbiEii AbiEii GT4_TuaH-like RVT-GII GIIM DUF5615 DUF433 Feature: gene Location: 9864-10514 bp Ori: OGP75677.1 Feature: domain Description: AbiEii Location: 9909-10062 bp Feature: domain Description: AbiEii Location: 9909-1 0062 bp Feature: domain Description: AbiEii Location: 10179-10440 bp Feature: domain Description: AbiEii Location: 1 01 79-1 0440 bp Feature: gene Location: 10787-12247 bp Ori: OGP75678.1 Feature: domain Description: GT4_TuaH-like Location: 10865-11951 bp Feature: domain Description: GT4_TuaH-like Location: 1 0865-1 1 951 bp Feature: gene Location: 12389-13720 bp Ori: OGP75679.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12683-13331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2683-1 3331 bp Feature: domain Description: GIIM Note: maturase Location: 13403-13613 bp Feature: domain Description: GIIM Note: maturase Location: 1 3403-1 361 3 bp Feature: gene Location: 14349-14711 bp Ori: OGP75680.1 Feature: domain Description: DUF5615 Location: 14361-14613 bp Feature: domain Description: DUF561 5 Location: 1 4361 -1 461 3 bp Feature: gene Location: 14708-15067 bp Ori: OGP75681.1 Feature: domain Description: DUF433 Location: 14756-14885 bp Feature: domain Description: DUF433 Location: 1 4756-1 4885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), GT4_TuaH-like (cd04950), RVT-GII, GIIM (pfam08388), DUF5615 (pfam18480), DUF433 (pfam04255)

Seq: MGQQ01000095.1 Deltaproteobacteria bacterium RBG_16_49_23 RBG_16_scaffold_360, whole genome shotgun sequence (48992 bp)
Overview 1 RT 1: 5240-13025 bp Neighborhood of RT #1 [5240, 13066] PRK06182 DUF3800 group_II_RT_mat RVT-UNC COG3943 Feature: gene Location: 5240-6100 bp Ori: OGP75292.1 Feature: domain Description: PRK06182 Location: 5264-6071 bp Feature: domain Description: PRK06182 Location: 52 64-6071 bp Feature: gene Location: 7036-7806 bp Ori: OGP75293.1 Feature: domain Description: DUF3800 Location: 7051-7672 bp Feature: domain Description: DUF3800 Location: 7051-7672 bp Feature: gene Location: 8151-10088 bp Ori: OGP75294.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 8253-8490 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 82 53-8490 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8538-9081 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 8538-9081 bp Feature: gene Location: 10088-11826 bp Feature: gene Location: 12020-13066 bp Ori: OGP75295.1 Feature: domain Description: COG3943 Location: 12059-13025 bp Feature: domain Description: COG3943 Location: 12 059-1302 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06182 (short chain dehydrogenase; Validated), DUF3800 (pfam12686), group_II_RT_mat (TIGR04416), RVT-UG9/RVT-UG19/RVT-UG23(RVT-UNC), COG3943 (Uncharacterized conserved protein )