myRT

myRT report for GCA_001801065.1_ASM180106v1

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Seq: MGWQ01000132.1 Gallionellales bacterium GWA2_59_43 gwa2_scaffold_66112, whole genome shotgun sequence (9511 bp)
Overview 1 RT 1: 6884-9333 bp Neighborhood of RT #1 [6884, 9428] upstrm_HI1419 COG3636 RVT-GII GIIM Feature: gene Location: 6884-7243 bp Ori: OGS81607.1 Feature: domain Description: upstrm_HI1419 Location: 6923-7178 bp Feature: domain Description: upstrm_HI1 41 9 Location: 6923-71 78 bp Feature: gene Location: 7248-7571 bp Ori: OGS81608.1 Feature: domain Description: COG3636 Location: 7260-7539 bp Feature: domain Description: COG3636 Location: 7260-7539 bp Feature: gene Location: 8091-9428 bp Ori: OGS81610.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8388-9048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8388-9048 bp Feature: domain Description: GIIM Note: maturase Location: 9120-9333 bp Feature: domain Description: GIIM Note: maturase Location: 91 20-9333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT upstrm_HI1419 (TIGR02683), COG3636 (DNA-binding prophage protein ), RVT-GII, GIIM (pfam08388)

Seq: MGWQ01000017.1 Gallionellales bacterium GWA2_59_43 gwa2_scaffold_12526, whole genome shotgun sequence (22956 bp)
Overview 1 RT 1: 15832-19922 bp Neighborhood of RT #1 [15832, 19927] COG4737 YiaG RVT-UG11 PRK13222 PRK05134 Feature: gene Location: 15832-16221 bp Ori: OGS93347.1 Feature: domain Description: COG4737 Location: 15874-16216 bp Feature: domain Description: COG4737 Location: 15874-162 16 bp Feature: gene Location: 16211-16543 bp Ori: OGS93348.1 Feature: domain Description: YiaG Location: 16238-16535 bp Feature: domain Description: YiaG Location: 162 38-16535 bp Feature: gene Location: 16631-17404 bp Ori: OGS93349.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 16763-17213 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 16763-172 13 bp Feature: gene Location: 18380-19066 bp Ori: OGS93350.1 Feature: domain Description: PRK13222 Location: 18413-19058 bp Feature: domain Description: PRK132 2 2 Location: 18413-19058 bp Feature: gene Location: 19202-19927 bp Ori: OGS93351.1 Feature: domain Description: PRK05134 Location: 19238-19922 bp Feature: domain Description: PRK05134 Location: 192 38-1992 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4737 (Uncharacterized protein ), YiaG (COG2944), RVT-UG11, PRK13222 (N-acetylmuramic acid 6-phosphate phosphatase MupP), PRK05134 (bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG)