myRT

myRT report for GCA_001801255.1_ASM180125v1

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Seq: MGXC01000124.1 Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22 rifcsplowo2_12_scaffold_940, whole genome shotgun sequence (110655 bp)
Overview 1 RT 1: 36883-40267 bp Neighborhood of RT #1 [36883, 40293] PIN_10 DUF4325 RVT-Retrons RHOD_1 Feature: gene Location: 36883-37287 bp Feature: domain Description: PIN_10 Location: 36889-37132 bp Feature: domain Description: PIN_1 0 Location: 36889-371 32 bp Feature: gene Location: 37296-37604 bp Feature: domain Description: DUF4325 Location: 37359-37539 bp Feature: domain Description: DUF4325 Location: 37359-37539 bp Feature: gene Location: 37648-38610 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37801-38350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37801 -38350 bp Feature: gene Location: 38940-39176 bp Feature: gene Location: 39841-40293 bp Feature: domain Description: RHOD_1 Location: 39919-40267 bp Feature: domain Description: RHOD_1 Location: 3991 9-40267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_10 (pfam18478), DUF4325 (pfam14213), RVT-Retrons, RHOD_1 (cd01522)

Seq: MGXC01000042.1 Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22 rifcsplowo2_12_scaffold_210, whole genome shotgun sequence (189399 bp)
Overview 1 RT 1: 75590-82848 bp Neighborhood of RT #1 [75590, 82868] DUF1566 Avd_like RVT-DGRs RVT-DGRs DUF1566 IPTL_CTERM BrnA_antitoxin Feature: gene Location: 75590-76384 bp Feature: domain Description: DUF1566 Location: 75923-76370 bp Feature: domain Description: DUF1566 Location: 7592 3-76370 bp Feature: gene Location: 76407-76817 bp Feature: domain Description: Avd_like Location: 76434-76746 bp Feature: domain Description: Avd_like Location: 76434-76746 bp Feature: gene Location: 77327-80080 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 77495-77777 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 77495-77777 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78758-79175 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 78758-79175 bp Feature: gene Location: 80085-81986 bp Feature: domain Description: DUF1566 Location: 80274-80643 bp Feature: domain Description: DUF1566 Location: 802 74-80643 bp Feature: domain Description: IPTL_CTERM Location: 81897-81975 bp Feature: domain Description: IPTL_CTERM Location: 81897-81975 bp Feature: gene Location: 82542-82868 bp Feature: domain Description: BrnA_antitoxin Location: 82626-82848 bp Feature: domain Description: BrnA_antitoxin Location: 82 62 6-82 848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, IPTL_CTERM (TIGR04174), BrnA_antitoxin (pfam14384)

Seq: MGXC01000051.1 Gallionellales bacterium RIFCSPLOWO2_12_FULL_59_22 rifcsplowo2_12_scaffold_23717, whole genome shotgun sequence (6180 bp)
Overview 1 RT 1: 261-2795 bp Neighborhood of RT #1 [261, 2795] RVT-GII GIIM Feature: gene Location: 261-1598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558-1215 bp Feature: domain Description: GIIM Note: maturase Location: 1290-1503 bp Feature: domain Description: GIIM Note: maturase Location: 1290-1503 bp Feature: gene Location: 1591-1833 bp Feature: gene Location: 2100-2795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)