myRT

myRT report for GCA_001801665.1_ASM180166v1

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Seq: MGYH01000016.1 Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_12 rifcsphigho2_12_scaffold_21167, whole genome shotgun sequence (7148 bp)
Overview 1 RT 1: 2675-6906 bp Neighborhood of RT #1 [2675, 7007] P-type_ATPase_cation RVT-GII GIIM Feature: gene Location: 2675-3262 bp Feature: gene Location: 3522-6242 bp Ori: OGT62901.1 Feature: domain Description: P-type_ATPase_cation Location: 3618-6204 bp Feature: domain Description: P-type_ATPase_cation Location: 361 8-6204 bp Feature: gene Location: 6393-7007 bp Ori: OGT62902.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6399-6618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6399-661 8 bp Feature: domain Description: GIIM Note: maturase Location: 6699-6906 bp Feature: domain Description: GIIM Note: maturase Location: 6699-6906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P-type_ATPase_cation (cd07543), RVT-GII, GIIM (pfam08388)

Seq: MGYH01000018.1 Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_45_12 rifcsphigho2_12_scaffold_2533, whole genome shotgun sequence (36250 bp)
Overview 1 RT 1: 7437-11898 bp Neighborhood of RT #1 [7437, 11900] GrpB Acetyltransf_1 RimL GrpB RVT-UG18 DDE_Tnp_IS66_C PHA_synth_III_C Feature: gene Location: 7437-8378 bp Ori: OGT62778.1 Feature: domain Description: GrpB Location: 7452-7923 bp Feature: domain Description: GrpB Location: 7452 -792 3 bp Feature: domain Description: Acetyltransf_1 Location: 7983-8295 bp Feature: domain Description: Acetyltransf_1 Location: 7983-82 95 bp Feature: gene Location: 8407-9459 bp Ori: OGT62802.1 Feature: domain Description: RimL Location: 8419-8908 bp Feature: domain Description: RimL Location: 8419-8908 bp Feature: domain Description: GrpB Location: 8947-9439 bp Feature: domain Description: GrpB Location: 8947-9439 bp Feature: gene Location: 9627-10103 bp Ori: OGT62779.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 9849-10083 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 9849-10083 bp Feature: gene Location: 10334-10531 bp Ori: OGT62780.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 10385-10457 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 10385-10457 bp Feature: gene Location: 10938-11900 bp Ori: OGT62781.1 Feature: domain Description: PHA_synth_III_C Location: 10974-11898 bp Feature: domain Description: PHA_synth_III_C Location: 10974-11898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GrpB (pfam04229), Acetyltransf_1 (pfam00583), RimL (COG1670), RVT-UG18, DDE_Tnp_IS66_C (pfam13817), PHA_synth_III_C