myRT

myRT report for GCA_001802165.1_ASM180216v1

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Seq: MGZM01000217.1 Geobacteraceae bacterium GWF2_54_21 gwf2_scaffold_6542, whole genome shotgun sequence (16493 bp)
Overview 1 RT 1: 4361-10844 bp Neighborhood of RT #1 [4361, 11461] RVT_N RVT-GII GIIM DEXDc Z1 Feature: gene Location: 4361-4930 bp Feature: gene Location: 4976-5908 bp Feature: gene Location: 6726-8198 bp Feature: RT Description: RVT_N Location: 6780-7023 bp Feature: RT Description: RVT_N Location: 6780-7023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7068-7692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7068-7692 bp Feature: domain Description: GIIM Note: maturase Location: 7746-7977 bp Feature: domain Description: GIIM Note: maturase Location: 7746-7977 bp Feature: gene Location: 8418-9218 bp Feature: gene Location: 9344-11461 bp Feature: domain Description: DEXDc Location: 9434-10001 bp Feature: domain Description: DEXDc Location: 9434-1 0001 bp Feature: domain Description: Z1 Location: 10217-10844 bp Feature: domain Description: Z1 Location: 1 021 7-1 0844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DEXDc (smart00487), Z1 (pfam10593)

Seq: MGZM01000153.1 Geobacteraceae bacterium GWF2_54_21 gwf2_scaffold_3041, whole genome shotgun sequence (25311 bp)
Overview 1 RT 1: 3148-7998 bp Neighborhood of RT #1 [3148, 7998] HTH_37 TPR RVT-GII GIIM TPR VCBS Feature: gene Location: 3148-3450 bp Feature: domain Description: HTH_37 Location: 3244-3415 bp Feature: domain Description: HTH_37 Location: 32 44-3415 bp Feature: gene Location: 3627-4232 bp Feature: domain Description: TPR Location: 3744-4008 bp Feature: domain Description: TPR Location: 3744-4008 bp Feature: gene Location: 4327-5727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4663-5281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4663-52 81 bp Feature: domain Description: GIIM Note: maturase Location: 5335-5545 bp Feature: domain Description: GIIM Note: maturase Location: 5335-5545 bp Feature: gene Location: 6361-7455 bp Feature: domain Description: TPR Location: 6460-6784 bp Feature: domain Description: TPR Location: 6460-6784 bp Feature: domain Description: VCBS Location: 7039-7165 bp Feature: domain Description: VCBS Location: 7039-7165 bp Feature: gene Location: 7606-7998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_37 (pfam13744), TPR (smart00028), RVT-GII, GIIM (pfam08388), VCBS (pfam13517)

Seq: MGZM01000233.1 Geobacteraceae bacterium GWF2_54_21 gwf2_scaffold_7720, whole genome shotgun sequence (12019 bp)
Overview 1 RT 1: 3971-9961 bp Neighborhood of RT #1 [3971, 9963] RVT-GII GIIM COG4951 SSL2 PLDc_C_DEXD_like YoeB_toxin Feature: gene Location: 3971-4216 bp Feature: gene Location: 4355-4792 bp Feature: gene Location: 4980-5810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4983-5361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4983 -53 61 bp Feature: domain Description: GIIM Note: maturase Location: 5406-5607 bp Feature: domain Description: GIIM Note: maturase Location: 5406-5607 bp Feature: gene Location: 6053-8989 bp Feature: domain Description: COG4951 Location: 6287-7268 bp Feature: domain Description: COG4951 Location: 6287-7268 bp Feature: domain Description: SSL2 Location: 7370-8516 bp Feature: domain Description: SSL2 Location: 73 70-8516 bp Feature: domain Description: PLDc_C_DEXD_like Location: 8576-8969 bp Feature: domain Description: PLDc_C_DEXD_like Location: 8576-8969 bp Feature: gene Location: 9709-9963 bp Feature: domain Description: YoeB_toxin Location: 9724-9961 bp Feature: domain Description: YoeB_toxin Location: 9724-9961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4951 (Uncharacterized protein ), SSL2 (COG1061), PLDc_C_DEXD_like (cd09126), YoeB_toxin (pfam06769)