myRT

myRT report for GCA_001802845.1_ASM180284v1

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Seq: MHAD01000086.1 Ignavibacteria bacterium GWF2_35_20 gwf2_scaffold_551, whole genome shotgun sequence (127417 bp)
Overview 1 RT 1: 82464-88133 bp Neighborhood of RT #1 [82464, 88174] COG4447 COG4447 PRK13684 COG4447 COG4447 BNR Por_Secre_tail RVT-GII GIIM DUF772 DDE_Tnp_1 Feature: gene Location: 82464-84632 bp Ori: OGU57427.1 Feature: domain Description: COG4447 Location: 82560-82812 bp Feature: domain Description: COG4447 Location: 82560-8281 2 bp Feature: domain Description: COG4447 Location: 82836-83058 bp Feature: domain Description: COG4447 Location: 82836-83058 bp Feature: domain Description: PRK13684 Location: 83085-83307 bp Feature: domain Description: PRK1 3684 Location: 83085-83307 bp Feature: domain Description: COG4447 Location: 83502-83685 bp Feature: domain Description: COG4447 Location: 83502-83685 bp Feature: domain Description: COG4447 Location: 83778-84069 bp Feature: domain Description: COG4447 Location: 83778-84069 bp Feature: domain Description: BNR Location: 84171-84201 bp Feature: domain Description: BNR Location: 841 71 -84201 bp Feature: domain Description: Por_Secre_tail Location: 84369-84567 bp Feature: domain Description: Por_Secre_tail Location: 84369-84567 bp Feature: gene Location: 84629-84838 bp Feature: gene Location: 85338-86615 bp Ori: OGU57465.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85617-86259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8561 7-86259 bp Feature: domain Description: GIIM Note: maturase Location: 86331-86544 bp Feature: domain Description: GIIM Note: maturase Location: 86331 -86544 bp Feature: gene Location: 86782-87021 bp Feature: gene Location: 87134-88174 bp Ori: OGU57430.1 Feature: domain Description: DUF772 Location: 87299-87518 bp Feature: domain Description: DUF772 Location: 87299-8751 8 bp Feature: domain Description: DDE_Tnp_1 Location: 87557-88133 bp Feature: domain Description: DDE_Tnp_1 Location: 87557-881 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK13684 (photosynthesis system II assembly factor Ycf48), BNR (pfam02012), Por_Secre_tail (TIGR04183), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)