myRT

myRT report for GCA_001802955.1_ASM180295v1

Download annotations/find similar RTs

Seq: MHAL01000007.1 Ignavibacteria bacterium RIFOXYA12_FULL_35_25 rifixya3_full_scaffold_112_curated, whole genome shotgun sequence (147274 bp)
Overview 1 RT 1: 39221-44866 bp Neighborhood of RT #1 [39221, 44931] DUF772 DDE_Tnp_1 RVT-GII GIIM COG4447 COG4447 PRK13684 COG4447 COG4447 BNR Por_Secre_tail Feature: gene Location: 39221-40261 bp Ori: OGU91562.1 Feature: domain Description: DUF772 Location: 39386-39605 bp Feature: domain Description: DUF772 Location: 39386-39605 bp Feature: domain Description: DDE_Tnp_1 Location: 39644-40220 bp Feature: domain Description: DDE_Tnp_1 Location: 39644-40220 bp Feature: gene Location: 40374-40613 bp Feature: gene Location: 40780-42057 bp Ori: OGU91645.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41059-41701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 059-41 701 bp Feature: domain Description: GIIM Note: maturase Location: 41773-41986 bp Feature: domain Description: GIIM Note: maturase Location: 41 773-41 986 bp Feature: gene Location: 42557-42766 bp Feature: gene Location: 42763-44931 bp Ori: OGU91565.1 Feature: domain Description: COG4447 Location: 42859-43111 bp Feature: domain Description: COG4447 Location: 42859-431 1 1 bp Feature: domain Description: COG4447 Location: 43135-43357 bp Feature: domain Description: COG4447 Location: 431 35-43357 bp Feature: domain Description: PRK13684 Location: 43384-43606 bp Feature: domain Description: PRK1 3684 Location: 43384-43606 bp Feature: domain Description: COG4447 Location: 43801-43984 bp Feature: domain Description: COG4447 Location: 43801 -43984 bp Feature: domain Description: COG4447 Location: 44077-44368 bp Feature: domain Description: COG4447 Location: 44077-44368 bp Feature: domain Description: BNR Location: 44470-44500 bp Feature: domain Description: BNR Location: 44470-44500 bp Feature: domain Description: Por_Secre_tail Location: 44668-44866 bp Feature: domain Description: Por_Secre_tail Location: 44668-44866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK13684 (photosynthesis system II assembly factor Ycf48), BNR (pfam02012), Por_Secre_tail (TIGR04183)