myRT

myRT report for GCA_001803045.1_ASM180304v1

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Seq: MHAR01000006.1 Ignavibacteria bacterium RIFOXYB12_FULL_35_14 rifoxyb3_full_scaffold_12, whole genome shotgun sequence (146864 bp)
Overview 1 RT 1: 101945-107614 bp Neighborhood of RT #1 [101945, 107655] COG4447 COG4447 PRK13684 COG4447 COG4447 BNR Por_Secre_tail RVT-GII GIIM DUF772 DDE_Tnp_1 Feature: gene Location: 101945-104113 bp Ori: OGU97891.1 Feature: domain Description: COG4447 Location: 102041-102293 bp Feature: domain Description: COG4447 Location: 1 02041 -1 02293 bp Feature: domain Description: COG4447 Location: 102317-102539 bp Feature: domain Description: COG4447 Location: 1 0231 7-1 02539 bp Feature: domain Description: PRK13684 Location: 102566-102788 bp Feature: domain Description: PRK1 3684 Location: 1 02566-1 02788 bp Feature: domain Description: COG4447 Location: 102983-103166 bp Feature: domain Description: COG4447 Location: 1 02983-1 031 66 bp Feature: domain Description: COG4447 Location: 103259-103550 bp Feature: domain Description: COG4447 Location: 1 03259-1 03550 bp Feature: domain Description: BNR Location: 103652-103682 bp Feature: domain Description: BNR Location: 1 03652-1 03682 bp Feature: domain Description: Por_Secre_tail Location: 103850-104048 bp Feature: domain Description: Por_Secre_tail Location: 1 03850-1 04048 bp Feature: gene Location: 104110-104319 bp Feature: gene Location: 104819-106096 bp Ori: OGU97932.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105098-105740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05098-1 05740 bp Feature: domain Description: GIIM Note: maturase Location: 105812-106025 bp Feature: domain Description: GIIM Note: maturase Location: 1 0581 2-1 06025 bp Feature: gene Location: 106263-106502 bp Feature: gene Location: 106615-107655 bp Ori: OGU97894.1 Feature: domain Description: DUF772 Location: 106780-106999 bp Feature: domain Description: DUF772 Location: 1 06780-1 06999 bp Feature: domain Description: DDE_Tnp_1 Location: 107038-107614 bp Feature: domain Description: DDE_Tnp_1 Location: 1 07038-1 0761 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK13684 (photosynthesis system II assembly factor Ycf48), BNR (pfam02012), Por_Secre_tail (TIGR04183), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)