myRT

myRT report for GCA_001803055.1_ASM180305v1

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Seq: MHAS01000037.1 Ignavibacteria bacterium RIFOXYB2_FULL_35_12 rifoxyb2_full_scaffold_188, whole genome shotgun sequence (115158 bp)
Overview 1 RT 1: 70339-76008 bp Neighborhood of RT #1 [70339, 76049] COG4447 COG4447 PRK13684 COG4447 COG4447 BNR Por_Secre_tail RVT-GII GIIM DUF772 DDE_Tnp_1 Feature: gene Location: 70339-72507 bp Ori: OGV04339.1 Feature: domain Description: COG4447 Location: 70435-70687 bp Feature: domain Description: COG4447 Location: 70435-70687 bp Feature: domain Description: COG4447 Location: 70711-70933 bp Feature: domain Description: COG4447 Location: 7071 1 -70933 bp Feature: domain Description: PRK13684 Location: 70960-71182 bp Feature: domain Description: PRK1 3684 Location: 70960-71 1 82 bp Feature: domain Description: COG4447 Location: 71377-71560 bp Feature: domain Description: COG4447 Location: 71 377-71 560 bp Feature: domain Description: COG4447 Location: 71653-71944 bp Feature: domain Description: COG4447 Location: 71 653-71 944 bp Feature: domain Description: BNR Location: 72046-72076 bp Feature: domain Description: BNR Location: 72046-72076 bp Feature: domain Description: Por_Secre_tail Location: 72244-72442 bp Feature: domain Description: Por_Secre_tail Location: 72244-72442 bp Feature: gene Location: 72504-72713 bp Feature: gene Location: 73213-74490 bp Ori: OGV04374.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73492-74134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73492-741 34 bp Feature: domain Description: GIIM Note: maturase Location: 74206-74419 bp Feature: domain Description: GIIM Note: maturase Location: 74206-7441 9 bp Feature: gene Location: 74657-74896 bp Feature: gene Location: 75009-76049 bp Ori: OGV04342.1 Feature: domain Description: DUF772 Location: 75174-75393 bp Feature: domain Description: DUF772 Location: 751 74-75393 bp Feature: domain Description: DDE_Tnp_1 Location: 75432-76008 bp Feature: domain Description: DDE_Tnp_1 Location: 75432-76008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK13684 (photosynthesis system II assembly factor Ycf48), BNR (pfam02012), Por_Secre_tail (TIGR04183), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)