myRT

myRT report for GCA_001803135.1_ASM180313v1

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Seq: MHAX01000080.1 Ignavibacteria bacterium RIFOXYC2_FULL_35_16 rifoxyc2_full_scaffold_72, whole genome shotgun sequence (100399 bp)
Overview 1 RT 1: 55561-61230 bp Neighborhood of RT #1 [55561, 61271] COG4447 COG4447 PRK13684 COG4447 COG4447 BNR Por_Secre_tail RVT-GII GIIM DUF772 DDE_Tnp_1 Feature: gene Location: 55561-57729 bp Ori: OGU98595.1 Feature: domain Description: COG4447 Location: 55657-55909 bp Feature: domain Description: COG4447 Location: 55657-55909 bp Feature: domain Description: COG4447 Location: 55933-56155 bp Feature: domain Description: COG4447 Location: 55933-561 55 bp Feature: domain Description: PRK13684 Location: 56182-56404 bp Feature: domain Description: PRK1 3684 Location: 561 82-56404 bp Feature: domain Description: COG4447 Location: 56599-56782 bp Feature: domain Description: COG4447 Location: 56599-56782 bp Feature: domain Description: COG4447 Location: 56875-57166 bp Feature: domain Description: COG4447 Location: 56875-571 66 bp Feature: domain Description: BNR Location: 57268-57298 bp Feature: domain Description: BNR Location: 57268-57298 bp Feature: domain Description: Por_Secre_tail Location: 57466-57664 bp Feature: domain Description: Por_Secre_tail Location: 57466-57664 bp Feature: gene Location: 57726-57935 bp Feature: gene Location: 58435-59712 bp Ori: OGU98630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58714-59356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5871 4-59356 bp Feature: domain Description: GIIM Note: maturase Location: 59428-59641 bp Feature: domain Description: GIIM Note: maturase Location: 59428-59641 bp Feature: gene Location: 59879-60118 bp Feature: gene Location: 60231-61271 bp Ori: OGU98598.1 Feature: domain Description: DUF772 Location: 60396-60615 bp Feature: domain Description: DUF772 Location: 60396-6061 5 bp Feature: domain Description: DDE_Tnp_1 Location: 60654-61230 bp Feature: domain Description: DDE_Tnp_1 Location: 60654-61 230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK13684 (photosynthesis system II assembly factor Ycf48), BNR (pfam02012), Por_Secre_tail (TIGR04183), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)