myRT

myRT report for GCA_001803225.1_ASM180322v1

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Seq: MHBF01000133.1 Lentisphaerae bacterium GWF2_44_16 gwf2_scaffold_40292, whole genome shotgun sequence (5836 bp)
Overview 1 RT 1: 410-1958 bp Neighborhood of RT #1 [410, 1966] RVT-Retrons PIN_VapC-like Feature: gene Location: 410-1255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 443-998 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 443-998 bp Feature: gene Location: 1342-1572 bp Feature: gene Location: 1562-1966 bp Feature: domain Description: PIN_VapC-like Location: 1577-1958 bp Feature: domain Description: PIN_VapC-like Location: 1 577-1 958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC-like (cd18715), RVT-Retrons

Seq: MHBF01000102.1 Lentisphaerae bacterium GWF2_44_16 gwf2_scaffold_3215, whole genome shotgun sequence (43690 bp)
Overview 1 RT 1: 23185-27014 bp Neighborhood of RT #1 [23185, 27514] WHTH_GntR PurR RVT-GII GIIM PulG PulG Feature: gene Location: 23185-24201 bp Feature: domain Description: WHTH_GntR Location: 23194-23386 bp Feature: domain Description: WHTH_GntR Location: 2 3194-2 3386 bp Feature: domain Description: PurR Location: 23395-24169 bp Feature: domain Description: PurR Location: 2 3395-2 4169 bp Feature: gene Location: 24328-24888 bp Feature: gene Location: 24885-26165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25188-25806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5188-2 5806 bp Feature: domain Description: GIIM Note: maturase Location: 25875-26103 bp Feature: domain Description: GIIM Note: maturase Location: 2 5875-2 6103 bp Feature: gene Location: 26170-26865 bp Feature: domain Description: PulG Location: 26260-26374 bp Feature: domain Description: PulG Location: 2 62 60-2 6374 bp Feature: gene Location: 26867-27514 bp Feature: domain Description: PulG Location: 26870-27014 bp Feature: domain Description: PulG Location: 2 6870-2 7014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WHTH_GntR (cd07377), PurR (COG1609), RVT-GII, GIIM (pfam08388), PulG (pfam11773)

Seq: MHBF01000027.1 Lentisphaerae bacterium GWF2_44_16 gwf2_scaffold_1484, whole genome shotgun sequence (36143 bp)
Overview 1 RT 1: 19471-23990 bp Neighborhood of RT #1 [19471, 24079] Avd_like RVT-DGRs PRK04247 tRNA_edit Feature: gene Location: 19471-20271 bp Feature: gene Location: 20848-21150 bp Feature: domain Description: Avd_like Location: 20854-21124 bp Feature: domain Description: Avd_like Location: 20854-21124 bp Feature: gene Location: 21265-22227 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21469-22081 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21469-22081 bp Feature: gene Location: 22224-23297 bp Feature: domain Description: PRK04247 Location: 22284-22467 bp Feature: domain Description: PRK04247 Location: 22284-22467 bp Feature: gene Location: 23618-24079 bp Feature: domain Description: tRNA_edit Location: 23693-23990 bp Feature: domain Description: tRNA_edit Location: 23 693 -23 990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, PRK04247 (endonuclease NucS), tRNA_edit (pfam04073)