myRT

myRT report for GCA_001803565.1_ASM180356v1

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Seq: MHDQ01000291.1 Nitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22 rifcsplowo2_12_scaffold_6716, whole genome shotgun sequence (16115 bp)
Overview 1 RT 1: 10585-15953 bp Neighborhood of RT #1 [10585, 15964] Cas2_I_II_III Cas1_I-II-III RVT-GII GIIM TPR COG4951 CRISPR_Cas6 Feature: gene Location: 10585-10860 bp Ori: OGW13134.1 Feature: domain Description: Cas2_I_II_III Location: 10594-10825 bp Feature: domain Description: Cas2_I_II_III Location: 1 0594-1 0825 bp Feature: gene Location: 10877-11872 bp Ori: OGW13135.1 Feature: domain Description: Cas1_I-II-III Location: 10883-11837 bp Feature: domain Description: Cas1 _I-II-III Location: 1 0883-1 1 837 bp Feature: gene Location: 11882-14875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12098-12674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2098-1 2674 bp Feature: domain Description: GIIM Note: maturase Location: 12725-12848 bp Feature: domain Description: GIIM Note: maturase Location: 1 2725-1 2848 bp Feature: domain Description: TPR Location: 13010-13295 bp Feature: domain Description: TPR Location: 1 301 0-1 3295 bp Feature: domain Description: COG4951 Location: 13379-14078 bp Feature: domain Description: COG4951 Location: 1 3379-1 4078 bp Feature: gene Location: 15008-15964 bp Ori: OGW13136.1 Feature: domain Description: CRISPR_Cas6 Location: 15587-15953 bp Feature: domain Description: CRISPR_Cas6 Location: 1 5587-1 5953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-GII, GIIM (pfam08388), TPR (smart00028), COG4951 (Uncharacterized protein ), CRISPR_Cas6 (pfam10040)