myRT

myRT report for GCA_001804345.1_ASM180434v1

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Seq: MHFU01000043.1 Omnitrophica bacterium RIFOXYB12_FULL_50_7 rifoxyb3_full_scaffold_1744, whole genome shotgun sequence (12625 bp)
Overview 1 RT 1: 2895-10672 bp Neighborhood of RT #1 [2895, 11655] HsdM RMtype1_S_BliBORF2384P-TRD1-CR1_like RMtype1_S_BliBORF2384P-TRD1-CR1_like RVT-AbiP2 COG0610 EstA Feature: gene Location: 2895-4411 bp Feature: domain Description: HsdM Location: 2958-4074 bp Feature: domain Description: HsdM Location: 2958-4074 bp Feature: gene Location: 4401-5585 bp Ori: OGX13793.1 Feature: domain Description: RMtype1_S_BliBORF2384P-TRD1-CR1_like Location: 4416-4938 bp Feature: domain Description: RMtype1 _S_BliBORF2384P-TRD1 -CR1 _like Location: 441 6-4938 bp Feature: domain Description: RMtype1_S_BliBORF2384P-TRD1-CR1_like Location: 5250-5529 bp Feature: domain Description: RMtype1 _S_BliBORF2384P-TRD1 -CR1 _like Location: 5250-5529 bp Feature: gene Location: 5582-7096 bp Ori: OGX13794.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6038-6491 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6038-6491 bp Feature: gene Location: 7104-10244 bp Ori: OGX13795.1 Feature: domain Description: COG0610 Location: 7125-10149 bp Feature: domain Description: COG061 0 Location: 71 25-1 01 49 bp Feature: gene Location: 10300-11655 bp Ori: OGX13796.1 Feature: domain Description: EstA Location: 10324-10672 bp Feature: domain Description: EstA Location: 1 0324-1 0672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_BliBORF2384P-TRD1-CR1_like (cd17496), RVT-AbiP2, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), EstA (COG1075)

Seq: MHFU01000153.1 Omnitrophica bacterium RIFOXYB12_FULL_50_7 rifoxyb3_full_scaffold_633, whole genome shotgun sequence (16994 bp)
Overview 1 RT 1: 9516-11320 bp Neighborhood of RT #1 [9516, 11320] RVT-GII GIIM ACTx2 Feature: gene Location: 9516-10067 bp Ori: OGX11157.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9534-9630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9534-9630 bp Feature: domain Description: GIIM Note: maturase Location: 9678-9897 bp Feature: domain Description: GIIM Note: maturase Location: 9678-9897 bp Feature: gene Location: 10349-10741 bp Feature: domain Description: ACTx2 Location: 10373-10736 bp Feature: domain Description: ACTx2 Location: 10373-10736 bp Feature: gene Location: 10874-11320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ACTx2 (COG4747)