myRT

myRT report for GCA_001804525.1_ASM180452v1

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Seq: MGZR01000062.1 Ignavibacteria bacterium GWA2_36_19 gwa2_scaffold_2056, whole genome shotgun sequence (48764 bp)
Overview 1 RT 1: 11655-17324 bp Neighborhood of RT #1 [11655, 17365] COG4447 COG4447 PRK13684 COG4447 COG4447 BNR Por_Secre_tail RVT-GII GIIM DUF772 DDE_Tnp_1 Feature: gene Location: 11655-13823 bp Feature: domain Description: COG4447 Location: 11751-12003 bp Feature: domain Description: COG4447 Location: 1 1 751 -1 2003 bp Feature: domain Description: COG4447 Location: 12027-12249 bp Feature: domain Description: COG4447 Location: 1 2027-1 2249 bp Feature: domain Description: PRK13684 Location: 12276-12498 bp Feature: domain Description: PRK1 3684 Location: 1 2276-1 2498 bp Feature: domain Description: COG4447 Location: 12693-12876 bp Feature: domain Description: COG4447 Location: 1 2693-1 2876 bp Feature: domain Description: COG4447 Location: 12969-13260 bp Feature: domain Description: COG4447 Location: 1 2969-1 3260 bp Feature: domain Description: BNR Location: 13362-13392 bp Feature: domain Description: BNR Location: 1 3362-1 3392 bp Feature: domain Description: Por_Secre_tail Location: 13560-13758 bp Feature: domain Description: Por_Secre_tail Location: 1 3560-1 3758 bp Feature: gene Location: 13820-14029 bp Feature: gene Location: 14529-15806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14808-15450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4808-1 5450 bp Feature: domain Description: GIIM Note: maturase Location: 15522-15735 bp Feature: domain Description: GIIM Note: maturase Location: 1 5522-1 5735 bp Feature: gene Location: 15973-16212 bp Feature: gene Location: 16325-17365 bp Feature: domain Description: DUF772 Location: 16490-16709 bp Feature: domain Description: DUF772 Location: 1 6490-1 6709 bp Feature: domain Description: DDE_Tnp_1 Location: 16748-17324 bp Feature: domain Description: DDE_Tnp_1 Location: 1 6748-1 7324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK13684 (photosynthesis system II assembly factor Ycf48), BNR (pfam02012), Por_Secre_tail (TIGR04183), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)