myRT

myRT report for GCA_001804715.1_ASM180471v1

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Seq: MHBA01000007.1 Ignavibacteria bacterium RIFOXYD12_FULL_36_8 rifoxyd3_full_scaffold_121, whole genome shotgun sequence (146808 bp)
Overview 1 RT 1: 101868-107537 bp Neighborhood of RT #1 [101868, 107578] COG4447 COG4447 PRK13684 COG4447 COG4447 BNR Por_Secre_tail RVT-GII GIIM DUF772 DDE_Tnp_1 Feature: gene Location: 101868-104036 bp Ori: OGV34896.1 Feature: domain Description: COG4447 Location: 101964-102216 bp Feature: domain Description: COG4447 Location: 1 01 964-1 0221 6 bp Feature: domain Description: COG4447 Location: 102240-102462 bp Feature: domain Description: COG4447 Location: 1 02240-1 02462 bp Feature: domain Description: PRK13684 Location: 102489-102711 bp Feature: domain Description: PRK1 3684 Location: 1 02489-1 0271 1 bp Feature: domain Description: COG4447 Location: 102906-103089 bp Feature: domain Description: COG4447 Location: 1 02906-1 03089 bp Feature: domain Description: COG4447 Location: 103182-103473 bp Feature: domain Description: COG4447 Location: 1 031 82-1 03473 bp Feature: domain Description: BNR Location: 103575-103605 bp Feature: domain Description: BNR Location: 1 03575-1 03605 bp Feature: domain Description: Por_Secre_tail Location: 103773-103971 bp Feature: domain Description: Por_Secre_tail Location: 1 03773-1 03971 bp Feature: gene Location: 104033-104242 bp Feature: gene Location: 104742-106019 bp Ori: OGV34936.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105021-105663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05021 -1 05663 bp Feature: domain Description: GIIM Note: maturase Location: 105735-105948 bp Feature: domain Description: GIIM Note: maturase Location: 1 05735-1 05948 bp Feature: gene Location: 106186-106425 bp Feature: gene Location: 106538-107578 bp Ori: OGV34899.1 Feature: domain Description: DUF772 Location: 106703-106922 bp Feature: domain Description: DUF772 Location: 1 06703-1 06922 bp Feature: domain Description: DDE_Tnp_1 Location: 106961-107537 bp Feature: domain Description: DDE_Tnp_1 Location: 1 06961 -1 07537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4447 (Uncharacterized protein related to plant photosystem II stability/assembly factor ), PRK13684 (photosynthesis system II assembly factor Ycf48), BNR (pfam02012), Por_Secre_tail (TIGR04183), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)