myRT

myRT report for GCA_001804805.1_ASM180480v1

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Seq: MHBH01000039.1 Lentisphaerae bacterium GWF2_49_21 gwf2_scaffold_230, whole genome shotgun sequence (136519 bp)
Overview 1 RT 1: 16356-20821 bp Neighborhood of RT #1 [16356, 21222] Prok-E2_D RVT-Retrons MngR PBP2_UgpB PulG Feature: gene Location: 16356-16664 bp Feature: gene Location: 16668-17348 bp Ori: OGV40307.1 Feature: domain Description: Prok-E2_D Location: 16773-17172 bp Feature: domain Description: Prok-E2_D Location: 1 6773-1 71 72 bp Feature: gene Location: 17799-18656 bp Ori: OGV40308.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17832-18390 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 7832-1 8390 bp Feature: gene Location: 19199-20608 bp Ori: OGV40309.1 Feature: domain Description: MngR Location: 19214-19412 bp Feature: domain Description: MngR Location: 1 921 4-1 941 2 bp Feature: domain Description: PBP2_UgpB Location: 19568-20549 bp Feature: domain Description: PBP2_UgpB Location: 1 9568-20549 bp Feature: gene Location: 20605-21222 bp Ori: OGV40310.1 Feature: domain Description: PulG Location: 20632-20821 bp Feature: domain Description: PulG Location: 20632-20821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prok-E2_D (pfam14460), RVT-Retrons, MngR (COG2188), PBP2_UgpB (cd14748), PulG (pfam11773)

Seq: MHBH01000081.1 Lentisphaerae bacterium GWF2_49_21 gwf2_scaffold_735, whole genome shotgun sequence (54537 bp)
Overview 1 RT 1: 24291-28981 bp Neighborhood of RT #1 [24291, 28981] DDE_Tnp_1 DDE_Tnp_1 RVT-Retrons Feature: gene Location: 24291-25016 bp Ori: OGV36332.1 Feature: domain Description: DDE_Tnp_1 Location: 24609-24918 bp Feature: domain Description: DDE_Tnp_1 Location: 2 4609-2 4918 bp Feature: gene Location: 25031-25552 bp Ori: OGV36333.1 Feature: domain Description: DDE_Tnp_1 Location: 25118-25265 bp Feature: domain Description: DDE_Tnp_1 Location: 2 5118-2 52 65 bp Feature: gene Location: 26611-27483 bp Ori: OGV36334.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26737-27250 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 6737-2 72 50 bp Feature: gene Location: 27665-28441 bp Feature: gene Location: 28607-28981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-Retrons

Seq: MHBH01000046.1 Lentisphaerae bacterium GWF2_49_21 gwf2_scaffold_251, whole genome shotgun sequence (108602 bp)
Overview 1 RT 1: 18415-27783 bp Neighborhood of RT #1 [18415, 28301] COG2865 nitrilase RVT-UG5 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like recD recD Feature: gene Location: 18415-19878 bp Ori: OGV39514.1 Feature: domain Description: COG2865 Location: 18451-19867 bp Feature: domain Description: COG2865 Location: 18451-19867 bp Feature: gene Location: 20281-21219 bp Ori: OGV39515.1 Feature: domain Description: nitrilase Location: 20512-21115 bp Feature: domain Description: nitrilase Location: 20512-21115 bp Feature: gene Location: 21216-23186 bp Ori: OGV39516.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21684-22200 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 21684-22200 bp Feature: gene Location: 23183-24601 bp Ori: OGV39517.1 Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 23561-23813 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 23 561-23 813 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 23903-24452 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 23 903 -24452 bp Feature: gene Location: 24594-28301 bp Ori: OGV39518.1 Feature: domain Description: recD Location: 26229-26859 bp Feature: domain Description: recD Location: 26229-26859 bp Feature: domain Description: recD Location: 27480-27783 bp Feature: domain Description: recD Location: 27480-27783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), nitrilase (cl11424), RVT-UG5, RMtype1_S_SonII-TRD2-CR2_like (cd17246), recD (TIGR01447)

Seq: MHBH01000069.1 Lentisphaerae bacterium GWF2_49_21 gwf2_scaffold_481, whole genome shotgun sequence (73445 bp)
Overview 1 RT 1: 28649-37259 bp Neighborhood of RT #1 [28649, 37259] SSL2 SSL2 SSL2 RVT-Retrons PMT_2 TPR TPR_2 Feature: gene Location: 28649-29335 bp Feature: gene Location: 29521-32247 bp Ori: OGV37494.1 Feature: domain Description: SSL2 Location: 29533-29908 bp Feature: domain Description: SSL2 Location: 29533-29908 bp Feature: domain Description: SSL2 Location: 30067-30403 bp Feature: domain Description: SSL2 Location: 30067-304 03 bp Feature: domain Description: SSL2 Location: 31186-31351 bp Feature: domain Description: SSL2 Location: 31186-31351 bp Feature: gene Location: 32248-33294 bp Ori: OGV37495.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32542-33091 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3254 2-33091 bp Feature: gene Location: 33864-35585 bp Ori: OGV37496.1 Feature: domain Description: PMT_2 Location: 34083-34500 bp Feature: domain Description: PMT_2 Location: 34 083-34 500 bp Feature: domain Description: TPR Location: 35193-35406 bp Feature: domain Description: TPR Location: 35193-354 06 bp Feature: domain Description: TPR_2 Location: 35445-35532 bp Feature: domain Description: TPR_2 Location: 354 4 5-35532 bp Feature: gene Location: 35634-37259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSL2 (COG1061), RVT-Retrons, PMT_2 (pfam13231), TPR (smart00028), TPR_2 (pfam07719)