myRT

myRT report for GCA_001806805.1_ASM180680v1

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Seq: KV786060.1 Aerococcus sp. HMSC23C02 genomic scaffold Scaffold728, whole genome shotgun sequence (511695 bp)
Overview 1 RT 1: 496352-505594 bp Neighborhood of RT #1 [496352, 506115] DppB PBP2_NikA_DppA_OppA_like RVT-Retrons COG3587 Mod Feature: gene Location: 496352-497311 bp Ori: OFT92325.1 Feature: domain Description: DppB Location: 496355-497300 bp Feature: domain Description: DppB Location: 496355-497300 bp Feature: gene Location: 497304-498881 bp Ori: OFT92326.1 Feature: domain Description: PBP2_NikA_DppA_OppA_like Location: 497412-498795 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like Location: 49741 2-498795 bp Feature: gene Location: 499340-501094 bp Ori: OFT92327.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 499481-500078 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 499481 -500078 bp Feature: gene Location: 501255-504230 bp Ori: OFT92328.1 Feature: domain Description: COG3587 Location: 501258-504201 bp Feature: domain Description: COG3587 Location: 501 258-504201 bp Feature: gene Location: 504241-506115 bp Ori: OFT92329.1 Feature: domain Description: Mod Location: 504361-505594 bp Feature: domain Description: Mod Location: 504361 -505594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppB (COG0601), PBP2_NikA_DppA_OppA_like (cl01709), RVT-Retrons, COG3587 (Restriction endonuclease ), Mod (COG2189)

Seq: KV786048.1 Aerococcus sp. HMSC23C02 genomic scaffold Scaffold25, whole genome shotgun sequence (1445 bp)
Overview 1 RT 1: 1-784 bp Neighborhood of RT #1 [1, 1445] RVT-UNC Feature: gene Location: 1-1445 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 127-784 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 12 7-784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)