myRT

myRT report for GCA_001807805.1_ASM180780v1

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Seq: KV791058.1 Staphylococcus sp. HMSC10C03 genomic scaffold Scaffold75, whole genome shotgun sequence (12386 bp)
Overview 1 RT 1: 4716-10929 bp Neighborhood of RT #1 [4716, 10931] LldP MSCRAMM_SdrC RVT-GII GIIM RepA_N RepA_N Staph_haemo Feature: gene Location: 4716-6320 bp Feature: domain Description: LldP Location: 4749-6312 bp Feature: domain Description: LldP Location: 4749-631 2 bp Feature: gene Location: 6889-7203 bp Feature: domain Description: MSCRAMM_SdrC Location: 7009-7183 bp Feature: domain Description: MSCRAMM_SdrC Location: 7009-71 83 bp Feature: gene Location: 7333-8619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7549-8164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7549-81 64 bp Feature: domain Description: GIIM Note: maturase Location: 8224-8458 bp Feature: domain Description: GIIM Note: maturase Location: 8224-8458 bp Feature: gene Location: 9865-10392 bp Feature: domain Description: RepA_N Location: 9883-10009 bp Feature: domain Description: RepA_N Location: 9883-1 0009 bp Feature: domain Description: RepA_N Location: 10144-10324 bp Feature: domain Description: RepA_N Location: 1 01 44-1 0324 bp Feature: gene Location: 10800-10931 bp Feature: domain Description: Staph_haemo Location: 10803-10929 bp Feature: domain Description: Staph_haemo Location: 1 0803-1 0929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Staph_haemo (pfam05480), LldP (COG1620), MSCRAMM_SdrC (NF000535), RVT-GII, GIIM (pfam08388), RepA_N (pfam06970)

Seq: KV791021.1 Staphylococcus sp. HMSC10C03 genomic scaffold Scaffold32, whole genome shotgun sequence (185382 bp)
Overview 1 RT 1: 160252-167912 bp Neighborhood of RT #1 [160252, 167912] DUF262 Trypsin_2 RVT-Retrons PKc Feature: gene Location: 160252-161939 bp Feature: domain Description: DUF262 Location: 160303-160813 bp Feature: domain Description: DUF2 62 Location: 160303-160813 bp Feature: gene Location: 162141-163649 bp Feature: domain Description: Trypsin_2 Location: 163071-163545 bp Feature: domain Description: Trypsin_2 Location: 163071-163545 bp Feature: gene Location: 164655-166439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 164787-165384 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 164787-165384 bp Feature: gene Location: 166727-167398 bp Feature: domain Description: PKc Location: 166745-167363 bp Feature: domain Description: PKc Location: 166745-167363 bp Feature: gene Location: 167619-167912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), Trypsin_2 (pfam13365), RVT-Retrons, PKc (cd00180)