myRT

myRT report for GCA_001808475.1_ASM180847v1

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Seq: KV793511.1 Klebsiella sp. HMSC09D12 genomic scaffold Scaffold980, whole genome shotgun sequence (277001 bp)
Overview 1 RT 1: 208154-214309 bp Neighborhood of RT #1 [208154, 214309] PRK13889 RVT-Retrons Feature: gene Location: 208154-208663 bp Feature: gene Location: 210320-211822 bp Feature: domain Description: PRK13889 Location: 210323-210902 bp Feature: domain Description: PRK1 3889 Location: 21 0323-21 0902 bp Feature: gene Location: 211899-212999 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 212040-212592 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 2040-21 2592 bp Feature: gene Location: 213364-213579 bp Feature: gene Location: 214034-214309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons

Seq: KV793497.1 Klebsiella sp. HMSC09D12 genomic scaffold Scaffold8, whole genome shotgun sequence (23665 bp)
Overview 1 RT 1: 19188-23661 bp Neighborhood of RT #1 [19188, 23665] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 19188-19859 bp Feature: domain Description: Plasmid_stab_B Location: 19203-19410 bp Feature: domain Description: Plasmid_stab_B Location: 192 03-19410 bp Feature: domain Description: Plasmid_stab_B Location: 19515-19722 bp Feature: domain Description: Plasmid_stab_B Location: 19515-1972 2 bp Feature: gene Location: 19862-20833 bp Feature: domain Description: StbA Location: 19865-20810 bp Feature: domain Description: StbA Location: 19865-2 0810 bp Feature: gene Location: 21082-22566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21484-22174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1484-2 2 174 bp Feature: gene Location: 22975-23406 bp Feature: domain Description: PRK10276 Location: 23026-23389 bp Feature: domain Description: PRK102 76 Location: 2 302 6-2 3389 bp Feature: gene Location: 23406-23665 bp Feature: domain Description: umuC Location: 23409-23661 bp Feature: domain Description: umuC Location: 2 3409-2 3661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)