myRT

myRT report for GCA_001809135.1_ASM180913v1

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Seq: KV795837.1 Enterococcus sp. HMSC072G01 genomic scaffold Scaffold96, whole genome shotgun sequence (3286 bp)
Overview 1 RT 1: 83-3255 bp Neighborhood of RT #1 [83, 3286] RVT-AbiP2 HsdM Feature: gene Location: 83-1471 bp Ori: OFN42828.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 344-809 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 344-809 bp Feature: gene Location: 1809-3286 bp Ori: OFN42827.1 Feature: domain Description: HsdM Location: 1830-3255 bp Feature: domain Description: HsdM Location: 1 830-3255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: KV795962.1 Enterococcus sp. HMSC072G01 genomic scaffold Scaffold365, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Ori: OFN47567.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV795918.1 Enterococcus sp. HMSC072G01 genomic scaffold Scaffold235, whole genome shotgun sequence (2714 bp)
Overview 1 RT 1: 123-2331 bp Neighborhood of RT #1 [123, 2331] RVT-GII HNHc Feature: gene Location: 123-1982 bp Ori: OFN48860.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 2-1173 bp Feature: domain Description: HNHc Note: nucleases Location: 1728-1866 bp Feature: domain Description: HNHc Note: nucleases Location: 1728-1866 bp Feature: gene Location: 2101-2331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV796017.1 Enterococcus sp. HMSC072G01 genomic scaffold Scaffold513, whole genome shotgun sequence (2257 bp)
Overview 1 RT 1: 1-1000 bp Neighborhood of RT #1 [1, 1513] RVT-GII Feature: gene Location: 1-1513 bp Ori: OFN45926.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KV795789.1 Enterococcus sp. HMSC072G01 genomic scaffold Scaffold25, whole genome shotgun sequence (11322 bp)
Overview 1 RT 1: 4595-9196 bp Neighborhood of RT #1 [4595, 9204] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 HTH_XRE Feature: gene Location: 4595-5854 bp Ori: OFN48591.1 Feature: domain Description: PRK09290 Location: 4601-5846 bp Feature: domain Description: PRK09290 Location: 4601-5 846 bp Feature: gene Location: 5970-6284 bp Ori: OFN48592.1 Feature: domain Description: AlbA_2 Location: 6009-6180 bp Feature: domain Description: AlbA_2 Location: 6009-6180 bp Feature: gene Location: 6430-7926 bp Ori: OFN48598.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6838-7294 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6838-7294 bp Feature: gene Location: 8104-8583 bp Ori: OFN48593.1 Feature: domain Description: DUF3841 Location: 8113-8488 bp Feature: domain Description: DUF3841 Location: 8113-8488 bp Feature: gene Location: 8959-9204 bp Ori: OFN48594.1 Feature: domain Description: HTH_XRE Location: 9010-9196 bp Feature: domain Description: HTH_XRE Location: 9010-9196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952), HTH_XRE (smart00530)

Seq: KV796068.1 Enterococcus sp. HMSC072G01 genomic scaffold Scaffold900, whole genome shotgun sequence (87292 bp)
Overview 1 RT 1: 14512-19648 bp Neighborhood of RT #1 [14512, 19648] CcmA AcrR RVT-GII GIIM Feature: gene Location: 14512-15393 bp Ori: OFN43462.1 Feature: domain Description: CcmA Location: 14515-15385 bp Feature: domain Description: CcmA Location: 14515-15385 bp Feature: gene Location: 15647-16246 bp Ori: OFN43463.1 Feature: domain Description: AcrR Location: 15665-16151 bp Feature: domain Description: AcrR Location: 156 6 5-16 151 bp Feature: gene Location: 16733-18121 bp Ori: OFN43464.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17054-17669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17054-176 6 9 bp Feature: domain Description: GIIM Note: maturase Location: 17726-17942 bp Feature: domain Description: GIIM Note: maturase Location: 17726 -17942 bp Feature: gene Location: 18214-18854 bp Feature: gene Location: 18955-19648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), AcrR (COG1309), RVT-GII, GIIM (pfam08388)

Seq: KV796004.1 Enterococcus sp. HMSC072G01 genomic scaffold Scaffold472, whole genome shotgun sequence (2698 bp)
Overview 1 RT 1: 117-1164 bp Neighborhood of RT #1 [117, 1979] RVT-GII Feature: gene Location: 117-1979 bp Ori: OFN46379.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII