myRT

myRT report for GCA_001809535.1_ASM180953v1

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Seq: KV797919.1 Aerococcus sp. HMSC062A02 genomic scaffold Scaffold137, whole genome shotgun sequence (40024 bp)
Overview 1 RT 1: 31835-37366 bp Neighborhood of RT #1 [31835, 37947] RVT-UG2 Abi_2 DUF5067 Feature: gene Location: 31835-32266 bp Feature: gene Location: 32396-32620 bp Feature: gene Location: 33388-34749 bp Ori: OFN05351.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 33607-34429 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 33607-34429 bp Feature: gene Location: 35515-36402 bp Ori: OFN05352.1 Feature: domain Description: Abi_2 Location: 35602-36091 bp Feature: domain Description: Abi_2 Location: 35602-36091 bp Feature: gene Location: 36871-37947 bp Ori: OFN05353.1 Feature: domain Description: DUF5067 Location: 36997-37366 bp Feature: domain Description: DUF5067 Location: 36997-37366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, Abi_2 (pfam07751), DUF5067 (pfam16729)

Seq: KV797949.1 Aerococcus sp. HMSC062A02 genomic scaffold Scaffold974, whole genome shotgun sequence (131206 bp)
Overview 1 RT 1: 88919-97651 bp Neighborhood of RT #1 [88919, 97677] RMtype1_S_HinAWORF1578P-TRD2-CR2_like RMtype1_S_HinAWORF1578P-TRD2-CR2_like COG0610 RVT-Retrons Strep_his_triad ZinT NlpA Feature: gene Location: 88919-90148 bp Ori: OFN00353.1 Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2-CR2_like Location: 88931-89462 bp Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2 -CR2 _like Location: 88931-89462 bp Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2-CR2_like Location: 89555-90110 bp Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2 -CR2 _like Location: 89555-90110 bp Feature: gene Location: 90161-93268 bp Ori: OFN00347.1 Feature: domain Description: COG0610 Location: 90188-93170 bp Feature: domain Description: COG0610 Location: 90188-93170 bp Feature: gene Location: 93668-95101 bp Ori: OFN00348.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93812-94406 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93812 -94406 bp Feature: gene Location: 95537-96463 bp Ori: OFN00349.1 Feature: domain Description: Strep_his_triad Location: 95759-95879 bp Feature: domain Description: Strep_his_triad Location: 95759-95879 bp Feature: domain Description: ZinT Location: 95897-96461 bp Feature: domain Description: ZinT Location: 95897-96461 bp Feature: gene Location: 96823-97677 bp Ori: OFN00350.1 Feature: domain Description: NlpA Location: 96826-97651 bp Feature: domain Description: NlpA Location: 9682 6-97651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_HinAWORF1578P-TRD2-CR2_like (cd17516), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons, Strep_his_triad (pfam04270), ZinT (pfam09223), NlpA (COG1464)