myRT

myRT report for GCA_001810595.1_ASM181059v1

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Seq: KV801928.1 Enterococcus sp. HMSC073E07 genomic scaffold Scaffold12, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 1-2542 bp Neighborhood of RT #1 [1, 3204] HsdM RVT-AbiP2 Feature: gene Location: 1-1478 bp Ori: OFL80792.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 22-1 447 bp Feature: gene Location: 1816-3204 bp Ori: OFL80793.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-2542 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-2542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: KV802014.1 Enterococcus sp. HMSC073E07 genomic scaffold Scaffold215, whole genome shotgun sequence (11323 bp)
Overview 1 RT 1: 4595-9196 bp Neighborhood of RT #1 [4595, 9204] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 HTH_XRE Feature: gene Location: 4595-5854 bp Ori: OFL79145.1 Feature: domain Description: PRK09290 Location: 4601-5846 bp Feature: domain Description: PRK092 90 Location: 4601-5846 bp Feature: gene Location: 5970-6284 bp Ori: OFL79146.1 Feature: domain Description: AlbA_2 Location: 6009-6180 bp Feature: domain Description: AlbA_2 Location: 6009-6180 bp Feature: gene Location: 6430-7926 bp Ori: OFL79152.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6838-7294 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6838-72 94 bp Feature: gene Location: 8104-8583 bp Ori: OFL79147.1 Feature: domain Description: DUF3841 Location: 8113-8488 bp Feature: domain Description: DUF3841 Location: 8113-8488 bp Feature: gene Location: 8959-9204 bp Ori: OFL79148.1 Feature: domain Description: HTH_XRE Location: 9010-9196 bp Feature: domain Description: HTH_XRE Location: 9010-9196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952), HTH_XRE (smart00530)

Seq: KV802086.1 Enterococcus sp. HMSC073E07 genomic scaffold Scaffold471, whole genome shotgun sequence (1105 bp)
Overview 1 RT 1: 721-1105 bp Neighborhood of RT #1 [721, 1105] RVT-GII Feature: gene Location: 721-1105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KV802092.1 Enterococcus sp. HMSC073E07 genomic scaffold Scaffold491, whole genome shotgun sequence (2685 bp)
Overview 1 RT 1: 115-1114 bp Neighborhood of RT #1 [115, 1941] RVT-GII Feature: gene Location: 115-1941 bp Ori: OFL75043.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 15-1114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KV802064.1 Enterococcus sp. HMSC073E07 genomic scaffold Scaffold382, whole genome shotgun sequence (2714 bp)
Overview 1 RT 1: 384-2476 bp Neighborhood of RT #1 [384, 2592] RVT-GII HNHc Feature: gene Location: 384-614 bp Feature: gene Location: 733-2592 bp Ori: OFL76783.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1783 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2476 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV801943.1 Enterococcus sp. HMSC073E07 genomic scaffold Scaffold50, whole genome shotgun sequence (1901 bp)
Overview 1 RT 1: 437-1646 bp Neighborhood of RT #1 [437, 1825] RVT-GII GIIM Feature: gene Location: 437-1825 bp Ori: OFL74937.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758-1373 bp Feature: domain Description: GIIM Note: maturase Location: 1430-1646 bp Feature: domain Description: GIIM Note: maturase Location: 1430-16 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KV802139.1 Enterococcus sp. HMSC073E07 genomic scaffold Scaffold680, whole genome shotgun sequence (1636 bp)
Overview 1 RT 1: 131-1517 bp Neighborhood of RT #1 [131, 1636] RVT-GII HNHc Feature: gene Location: 131-1636 bp Ori: OFL72165.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-7 97 bp Feature: domain Description: HNHc Note: nucleases Location: 1352-1517 bp Feature: domain Description: HNHc Note: nucleases Location: 1352-1517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)