myRT

myRT report for GCA_001811715.1_ASM181171v1

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Seq: KV806461.1 Enterococcus sp. HMSC073E08 genomic scaffold Scaffold964, whole genome shotgun sequence (2642 bp)
Overview 1 RT 1: 72-1071 bp Neighborhood of RT #1 [72, 1898] RVT-GII Feature: gene Location: 72-1898 bp Ori: OFK41992.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-1 071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KV806306.1 Enterococcus sp. HMSC073E08 genomic scaffold Scaffold163, whole genome shotgun sequence (2674 bp)
Overview 1 RT 1: 83-2291 bp Neighborhood of RT #1 [83, 2291] RVT-GII HNHc Feature: gene Location: 83-1942 bp Ori: OFK50125.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 -1133 bp Feature: domain Description: HNHc Note: nucleases Location: 1688-1826 bp Feature: domain Description: HNHc Note: nucleases Location: 1688-182 6 bp Feature: gene Location: 2061-2291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV806274.1 Enterococcus sp. HMSC073E08 genomic scaffold Scaffold99, whole genome shotgun sequence (1105 bp)
Overview 1 RT 1: 1-385 bp Neighborhood of RT #1 [1, 385] RVT-GII Feature: gene Location: 1-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 4-3 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KV806464.1 Enterococcus sp. HMSC073E08 genomic scaffold Scaffold1058, whole genome shotgun sequence (1901 bp)
Overview 1 RT 1: 77-1286 bp Neighborhood of RT #1 [77, 1465] RVT-GII GIIM Feature: gene Location: 77-1465 bp Ori: OFK51468.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1013 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Feature: domain Description: GIIM Note: maturase Location: 1070-1286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KV806222.1 Enterococcus sp. HMSC073E08 genomic scaffold Scaffold25, whole genome shotgun sequence (3279 bp)
Overview 1 RT 1: 80-3252 bp Neighborhood of RT #1 [80, 3279] RVT-AbiP2 HsdM Feature: gene Location: 80-1468 bp Ori: OFK48739.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 341-806 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 341-806 bp Feature: gene Location: 1806-3279 bp Ori: OFK48738.1 Feature: domain Description: HsdM Location: 1827-3252 bp Feature: domain Description: HsdM Location: 1827-325 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: KV806233.1 Enterococcus sp. HMSC073E08 genomic scaffold Scaffold40, whole genome shotgun sequence (11315 bp)
Overview 1 RT 1: 2116-6717 bp Neighborhood of RT #1 [2116, 6725] HTH_XRE DUF3841 RVT-AbiP2 AlbA_2 PRK09290 Feature: gene Location: 2116-2361 bp Ori: OFK45970.1 Feature: domain Description: HTH_XRE Location: 2167-2353 bp Feature: domain Description: HTH_XRE Location: 216 7-2353 bp Feature: gene Location: 2737-3216 bp Ori: OFK45971.1 Feature: domain Description: DUF3841 Location: 2746-3121 bp Feature: domain Description: DUF3841 Location: 2746 -3121 bp Feature: gene Location: 3394-4890 bp Ori: OFK45978.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3802-4258 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3802-4258 bp Feature: gene Location: 5036-5350 bp Ori: OFK45972.1 Feature: domain Description: AlbA_2 Location: 5075-5246 bp Feature: domain Description: AlbA_2 Location: 5075-5246 bp Feature: gene Location: 5466-6725 bp Ori: OFK45973.1 Feature: domain Description: PRK09290 Location: 5472-6717 bp Feature: domain Description: PRK09290 Location: 5472-6 717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), DUF3841 (pfam12952), RVT-AbiP2, AlbA_2 (pfam04326), PRK09290 (allantoate amidohydrolase; Reviewed)

Seq: KV806317.1 Enterococcus sp. HMSC073E08 genomic scaffold Scaffold195, whole genome shotgun sequence (1636 bp)
Overview 1 RT 1: 131-1517 bp Neighborhood of RT #1 [131, 1636] RVT-GII HNHc Feature: gene Location: 131-1636 bp Ori: OFK49610.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-7 97 bp Feature: domain Description: HNHc Note: nucleases Location: 1352-1517 bp Feature: domain Description: HNHc Note: nucleases Location: 1352-1517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)