myRT

myRT report for GCA_001812155.1_ASM181215v1

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Seq: KV807979.1 Lactobacillus sp. HMSC066G01 genomic scaffold Scaffold147, whole genome shotgun sequence (71733 bp)
Overview 1 RT 1: 889-6898 bp Neighborhood of RT #1 [889, 7339] DDE_Tnp_1 DDE_5 RVT-UG2 HTH_XRE LysM Smc SMC_prok_A Feature: gene Location: 889-1515 bp Ori: OFJ99865.1 Feature: domain Description: DDE_Tnp_1 Location: 934-1273 bp Feature: domain Description: DDE_Tnp_1 Location: 934-1 273 bp Feature: gene Location: 1651-2125 bp Feature: domain Description: DDE_5 Location: 1729-2113 bp Feature: domain Description: DDE_5 Location: 1 729-21 1 3 bp Feature: gene Location: 2113-3699 bp Ori: OFJ99863.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2323-3193 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2323-31 93 bp Feature: gene Location: 4376-4702 bp Ori: OFJ99864.1 Feature: domain Description: HTH_XRE Location: 4403-4574 bp Feature: domain Description: HTH_XRE Location: 4403-4574 bp Feature: gene Location: 5359-7339 bp Feature: domain Description: LysM Location: 5647-5785 bp Feature: domain Description: LysM Location: 5647-5785 bp Feature: domain Description: Smc Location: 6001-6625 bp Feature: domain Description: Smc Location: 6001 -6625 bp Feature: domain Description: SMC_prok_A Location: 6661-6898 bp Feature: domain Description: SMC_prok_A Location: 6661 -6898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), DDE_5 (pfam13546), RVT-UG2, HTH_XRE (smart00530), LysM (smart00257), Smc (COG1196), SMC_prok_A (TIGR02169)